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タグ: fret [205 articles]

Recent papers classified by the tag fret.
  • Single-molecule nonequilibrium periodic Mg2+-concentration jump experiments reveal details of the early folding pathways of a large RNA
    Proceedings of the National Academy of Sciences (30 April 2008), 0801436105.
    by Xiaohui Qu, Glenna J Smith, Kang T Lee, Tobin R Sosnick, Tao Pan, Norbert F Scherer
    posted to singlemolecule rnasep rna fret fluorescent by zwang on 2008-05-05 14:20:56 as **
  • Visualization of AP-1 NF-kappaB ternary complexes in living cells by using a BiFC-based FRET
    Proceedings of the National Academy of Sciences (2 January 2008), 0705181105.
    by John Y Shyu, Christopher D Suarez, Chang-Deng Hu
    posted to bifc complex fluorescent fret by zwang on 2008-01-03 08:10:45 as ** along with 2 people jyuh lechristophe
  • An intramolecular FRET system monitors fingers subdomain opening in Klentaq1
    Protein Sci, Vol. 17, No. 3. (1 March 2008), pp. 401-408.
    by William J Allen, Paul J Rothwell, Gabriel Waksman
    posted to domain fret invivo subunit by zwang on 2008-02-22 12:42:25 as ***
  • Single-molecule fluorescence resonance energy transfer reveals a dynamic equilibrium between closed and open conformations of syntaxin 1
    PNAS, Vol. 100, No. 26. (23 December 2003), pp. 15516-15521.
    by M Margittai, J Widengren, E Schweinberger, GF Schroder, S Felekyan, E Haustein, M Konig, D Fasshauer, H Grubmuller, R Jahn, CAM Seidel
    posted to fret single_molecule by yusdi on 2008-04-05 15:49:59 as ** along with 1 person satulovsky
  • Probing the interaction between two single molecules: Fluorescence resonance energy transfer between a single donor and a single acceptor
    PNAS, Vol. 93, No. 13. (25 June 1996), pp. 6264-6268.
    by T Ha, Th Enderle, DF Ogletree, DS Chemla, PR Selvin, S Weiss
    posted to classic fret single_molecule by yusdi on 2008-03-30 19:59:17 as ** along with 1 person FBerkemeier
  • The ATP-waiting conformation of rotating F1-ATPase revealed by single-pair fluorescence resonance energy transfer.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 16. (5 August 2003), pp. 9314-9318.
    by R Yasuda, T Masaike, K Adachi, H Noji, H Itoh, K Kinosita
    posted to fret single_molecule by yusdi on 2008-04-05 15:48:51 as **
  • Energy transfer: a spectroscopic ruler.
    Proc Natl Acad Sci U S A, Vol. 58, No. 2. (August 1967), pp. 719-726.
    by L Stryer, RP Haugland
    posted to classic fret by yusdi on 2008-03-30 19:55:07 as **
  • Single-molecule protein folding: Diffusion fluorescence resonance energy transfer studies of the denaturation of chymotrypsin inhibitor 2
    PNAS, Vol. 97, No. 10. (9 May 2000), pp. 5179-5184.
    by Ashok A Deniz, Ted A Laurence, Gangamani S Beligere, Maxime Dahan, Andrew B Martin, Daniel S Chemla, Philip E Dawson, Peter G Schultz, Shimon Weiss
    posted to fret protein_folding single_molecule by yusdi on 2008-04-05 15:44:45 as **** along with 2 people seamus1089 FBerkemeier
  • Studies on the structure and dynamics of the human telomeric G quadruplex by single-molecule fluorescence resonance energy transfer.
    Proc Natl Acad Sci U S A, Vol. 100, No. 25. (9 December 2003), pp. 14629-14634.
    by L Ying, JJ Green, H Li, D Klenerman, S Balasubramanian
    posted to fret single_molecule by yusdi on 2008-04-05 15:43:54 as ** along with 1 person bpagano
  • NC2 mobilizes TBP on core promoter TATA boxes
    Nature Structural & Molecular Biology, Vol. 14, No. 12. (11 November 2007), pp. 1196-1201.
    by Peter Schluesche, Gertraud Stelzer, Elisa Piaia, Don C Lamb, Michael Meisterernst
    posted to fret single_molecule by yusdi on 2008-04-05 15:37:52 as ****
  • Single-molecule tracking of mRNA exiting from RNA polymerase II.
    Proc Natl Acad Sci U S A (28 December 2007)
    by Joanna Andrecka, Robert Lewis, Florian Brückner, Elisabeth Lehmann, Patrick Cramer, Jens Michaelis
    posted to fret rnap single_molecule transcription by yusdi on 2008-04-05 15:32:33 as **** along with 1 person margaritis
  • Ratiometric measurement and identification of single diffusing molecules
    Chemical Physics, Vol. 247, No. 1. (1 August 1999), pp. 85-106.
    by Maxime Dahan, Ashok A Deniz, Taekjip Ha, Daniel S Chemla, Peter G Schultz, Shimon Weiss
    posted to classic fret single_molecule by yusdi on 2008-04-05 15:31:12 as ** along with 1 person seamus1089
  • Single-pair fluorescence resonance energy transfer on freely diffusing molecules: observation of Förster distance dependence and subpopulations.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 96, No. 7. (30 March 1999), pp. 3670-3675.
    by AA Deniz, M Dahan, JR Grunwell, T Ha, AE Faulhaber, DS Chemla, S Weiss, PG Schultz
    posted to classic fret single_molecule by yusdi on 2008-04-05 15:26:21 as ****
  • Structural dynamics and processing of nucleic acids revealed by single-molecule spectroscopy.
    Biochemistry, Vol. 43, No. 14. (13 April 2004), pp. 4055-4063.
    by T Ha
    posted to fret review single_molecule tirf by yusdi on 2008-04-05 15:15:56 as ****
  • Fluorescence Spectroscopy of Single Biomolecules
    Science, Vol. 283, No. 5408. (12 March 1999), pp. 1676-1683.
    by Shimon Weiss
    posted to classic fret single_molecule by yusdi on 2008-04-05 15:07:24 as ** along with 2 people and 1 group FBerkemeier rodney Kopelman_Group
  • Illuminating Single Molecules in Condensed Matter
    Science, Vol. 283, No. 5408. (12 March 1999), pp. 1670-1676.
    by WE Moerner, Michel Orrit
    posted to classic fret single_molecule by yusdi on 2008-04-05 15:06:12 as read along with 1 person and 1 group samjlord moernerlab
  • Accurate Single Molecule FRET Efficiency Determination for Surface Immobilized DNA Using Maximum Likelihood Calculated Lifetimes
    J. Phys. Chem. B, Vol. 111, No. 11. (22 March 2007), pp. 2986-2990.
    by JB Edel, JS Eid, A Meller
    posted to dyes fret oxygen-scavenger by yanjiang on 2007-08-25 01:23:55 as *** along with 1 group moernerlab
  • Single-molecule measurements of the opening and closing of the DNA gate by eukaryotic topoisomerase II
    Proceedings of the National Academy of Sciences, Vol. 104, No. 12. (20 March 2007), pp. 4840-4845.
    by Derike R Smiley, Tammy R Collins, Gordon G Hammes, Tao-Shih Hsieh
    posted to fret by yanjiang on 2007-10-02 01:21:19 as **
  • Single-molecule fluorescence resonance energy transfer.
    Methods, Vol. 25, No. 1. (September 2001), pp. 78-86.
    by T Ha
    posted to fret by yanjiang on 2007-03-07 21:02:46 as ** along with 2 people and 2 groups rodney yusdi moernerlab Kopelman_Group
  • Heterotrimeric G proteins precouple with G protein-coupled receptors in living cells.
    Proc Natl Acad Sci U S A, Vol. 102, No. 51. (20 December 2005), pp. 18706-18711.
    by M Nobles, A Benians, A Tinker
    posted to dimer fret gpcr gproteins by xdeupi on 2006-02-06 08:53:47 as ** along with 1 group LabCompMed
  • Structure and conformational changes in the C-terminal domain of the beta 2-adrenoceptor: Insights from fluorescence resonance energy tranfer studies.
    J Biol Chem (8 March 2007)
    by Sebastien Granier, Samuel Kim, Aaron M M Shafer, Venkata R P R Ratnala, Juan J J Fung, Richard N N Zare, Brian K K Kobilka
    posted to activation b2ar cterm dynamics fret structure by xdeupi on 2007-03-21 11:39:56 as ** along with 1 group LabCompMed
  • Real-time analysis of agonist-induced activation of protease-activated receptor 1/Galphai1 protein complex measured by bioluminescence resonance energy transfer in living cells.
    Mol Pharmacol, Vol. 71, No. 5. (May 2007), pp. 1329-1340.
    by MA Ayoub, D Maurel, V Binet, M Fink, L Prézeau, H Ansanay, JP Pin
    posted to activation fret by xdeupi on 2007-06-02 19:29:56 as ** along with 1 group LabCompMed
  • Bioluminescence resonance energy transfer as a screening assay: Focus on partial and inverse agonism.
    J Biomol Screen, Vol. 12, No. 1. (February 2007), pp. 41-49.
    by L Elster, C Elling, A Heding
    posted to activation agonist b2ar fret ligands by xdeupi on 2007-04-10 18:50:15 as ** along with 1 group LabCompMed
  • GRK specificity for beta -arrestin recruitment to the beta 2-adrenergic receptor revealed by fluorescence resonance energy transfer.
    J Biol Chem (10 May 2006)
    by Jonathan D D Violin, Xiu-Rong R Ren, Robert J J Lefkowitz
    posted to arrestin b2ar fret gpcr by xdeupi on 2006-09-23 11:20:25 as *** along with 1 person and 1 group tkershaw LabCompMed
  • FRET Study of Membrane Proteins: Simulation-Based Fitting for Analysis of Membrane Protein Embedment and Association
    Biophys. J., Vol. 91, No. 2. (15 July 2006), pp. 454-466.
    by Petr V Nazarov, Rob B Koehorst, Werner L Vos, Vladimir V Apanasovich, Marcus A Hemminga
    posted to dimer fluorescence fret theory by xdeupi on 2008-04-02 13:50:03 as ***** along with 1 person dimka
  • Kappa-squared: from nuisance to new sense
    Reviews in Molecular Biotechnology, Vol. 82, No. 3. (January 2002), pp. 181-196.
    by BW van der Meer
    posted to fret by waszak on 2008-06-30 00:25:00 as **
  • A Flexible Approach to the Calculation of Resonance Energy Transfer Efficiency between Multiple Donors and Acceptors in Complex Geometries
    Biophys. J., Vol. 89, No. 6. (1 December 2005), pp. 3822-3836.
    by Ben Corry, Dylan Jayatilaka, Paul Rigby
    posted to smfret fret by waszak on 2008-06-20 23:42:55 as ** along with 1 person paulschlesinger
  • Determination of the orientational distribution and orientation factor for transfer between membrane-bound fluorophores using a confocal microscope.
    Biophysical journal, Vol. 91, No. 3. (1 August 2006), pp. 1032-1045.
    by B Corry, D Jayatilaka, B Martinac, P Rigby
    posted to smfret fret by waszak on 2008-06-20 23:38:14 as **
  • Analysis of single-molecule FRET trajectories using hidden Markov modeling.
    Biophysical journal, Vol. 91, No. 5. (1 September 2006), pp. 1941-1951.
    by SA McKinney, C Joo, T Ha
    posted to smfret hmm fret by waszak on 2008-06-20 23:25:25 as **
  • A practical guide to single-molecule FRET
    Nat Meth, Vol. 5, No. 6. (June 2008), pp. 507-516.
    by Rahul Roy, Sungchul Hohng, Taekjip Ha
    posted to smfret fret by waszak on 2008-06-20 23:24:49 as ** along with 3 people and 1 group jyuh samjlord Fritz moernerlab
  • Supersensitive Ras activation in dendrites and spines revealed by two-photon fluorescence lifetime imaging
    Nature Neuroscience, Vol. 9, No. 2. (22 January 2006), pp. 283-291.
    by Ryohei Yasuda, Christopher D Harvey, Haining Zhong, Aleksander Sobczyk, Linda van Aelst, Karel Svoboda
    posted to flim-paper fret by touretti_chris on 2006-02-23 15:49:24 as read along with 1 person manduca
  • Mg2+-dependent folding of a Diels-Alderase ribozyme probed by single-molecule FRET analysis
    Nucleic Acids Research, Vol. 35, No. 6. (March 2007), pp. 2047-2059.
    by Kobitski, Andrei, Nierth, Alexander, Helm, Mark, Jaschke, Andres, Nienhaus, G Ulrich
    posted to ulm nienhaus kobitski fret diplomarbeit diels alderase by toerst on 2008-07-17 13:08:43 as read
  • Fluorescence resonance energy transfer-based stoichiometry in living cells.
    Biophys J, Vol. 83, No. 6. (December 2002), pp. 3652-3664.
    by A Hoppe, K Christensen, JA Swanson
    posted to g-faktor fret by toerst on 2008-07-17 17:11:26 as **** along with 4 people and 1 group nahnah dark_innocent Fritz benlin neurolit
  • Measurement of FRET efficiency and ratio of donor to acceptor concentration in living cells.
    Biophys J (30 June 2006)
    by Huanmian Chen, Henry L L Puhl, Srinagesh V V Koushik, Steven S S Vogel, Stephen R R Ikeda
    posted to g-faktor fret fluorescence by toerst on 2008-07-17 16:51:56 as read along with 3 people and 1 group dark_innocent Fritz haisent neurolit
  • Principles of Two-Photon Excitation Microscopy and Its Applications to Neuroscience
    Neuron, Vol. 50, No. 6. (June 2006), pp. 823-839.
    by Karel Svoboda, Ryohei Yasuda
    posted to caged compound flim frap fret microscopy neuroscience photon review two by tmiya on 2006-06-16 13:15:44 as *** along with 2 people frooonk fluomouse
  • FRET or No FRET: A Quantitative Comparison
    Biophys. J., Vol. 84, No. 6. (1 June 2003), pp. 3992-4010.
    by Claude Berney, Gaudenz Danuser
    posted to fret mathematical by sharatjv on 2006-07-10 22:08:18 as ** along with 2 people and 1 group dark_innocent Fritz neurolit
  • The dynamic nature of the four-way junction of the hepatitis C virus IRES.
    RNA (New York, N.Y.), Vol. 9, No. 7. (July 2003), pp. 809-820.
    by SE Melcher, TJ Wilson, DM Lilley
    posted to structure rna ires hcv fret by semelcher on 2008-05-11 20:03:59 as read
  • The kink-turn motif in RNA is dimorphic, and metal ion-dependent.
    RNA (New York, N.Y.), Vol. 10, No. 2. (February 2004), pp. 254-264.
    by TA Goody, SE Melcher, DG Norman, DM Lilley
    posted to structure rna k-turn fret by semelcher on 2008-05-11 20:03:47 as read
  • Induced fit of RNA on binding the L7Ae protein to the kink-turn motif.
    RNA (New York, N.Y.), Vol. 11, No. 8. (August 2005), pp. 1192-1200.
    by B Turner, SE Melcher, TJ Wilson, DG Norman, DM Lilley
    posted to structure rna k-turn fret by semelcher on 2008-05-11 20:03:39 as read
  • Shot-Noise Limited Single-Molecule FRET Histograms: Comparison between Theory and Experiments
    J. Phys. Chem. B, Vol. 110, No. 44. (9 November 2006), pp. 22103-22124.
    by E Nir, X Michalet, KM Hamadani, TA Laurence, D Neuhauser, Y Kovchegov, S Weiss
    posted to single_molecule shot_noise fret alex by seamus1089 on 2008-06-09 11:30:55 as read along with 1 person yusdi
  • Specific Photoaffinity Labeling Induced by Energy Transfer: Application to Irreversible Inhibition of Acetylcholinesterase
    Proceedings of the National Academy of Sciences, Vol. 77, No. 11. (1 November 1980), pp. 6439-6442.
    by Maurice P Goeldner, Christian G Hirth
    posted to bioconjugation fret photochemistry by samjlord on 2007-09-21 00:09:59 as read along with 1 group moernerlab
  • A FlAsH-based FRET approach to determine G protein–coupled receptor activation in living cells
    Nature Methods, Vol. 2, No. 3. (17 February 2005), pp. 171-176.
    by Carsten Hoffmann, Guido Gaietta, Moritz Bünemann, Stephen R Adams, Silke Oberdorff-Maass, Björn Behr, Jean-Pierre Vilardaga, Roger Y Tsien, Mark H Ellisman, Martin J Lohse
    posted to bioconjugation fluorophores fret by samjlord on 2007-06-26 01:06:01 as ** along with 4 people and 2 groups amwands batallah dark_innocent Fritz neurolit moernerlab
  • Evidence of an Intermediate and Parallel Pathways in Protein Unfolding from Single-Molecule Fluorescence
    J. Am. Chem. Soc. (29 May 2008)
    by Angel Orte, Timothy D Craggs, Samuel S White, Sophie E Jackson, David Klenerman
    posted to sms proteins fret by samjlord on 2008-05-29 23:56:24 as ** along with 1 person and 1 group haisent moernerlab
  • Orientational and Dynamical Heterogeneity of Rhodamine 6G Terminally Attached to a DNA Helix Revealed by NMR and Single-Molecule Fluorescence Spectroscopy
    J. Am. Chem. Soc. (27 September 2007)
    by H Neubauer, N Gaiko, S Berger, J Schaffer, C Eggeling, J Tuma, L Verdier, CAM Seidel, C Griesinger, A Volkmer
    posted to fcs fret by samjlord on 2007-10-01 17:19:13 as *
  • Single-Pair FRET Characterization of DNA Tweezers
    Nano Lett. (27 October 2006)
    by BK Muller, A Reuter, FC Simmel, DC Lamb
    posted to dna fret sms by samjlord on 2006-11-06 06:09:07 as ** along with 1 group moernerlab
  • Solution-Phase Single Quantum Dot Fluorescence Resonance Energy Transfer
    J. Am. Chem. Soc. (2 November 2006)
    by T Pons, IL Medintz, X Wang, DS English, H Mattoussi
    posted to fluorophores fret qd by samjlord on 2006-11-06 05:11:29 as ** along with 1 group moernerlab
  • Analysis of Photobleaching in Single-Molecule Multicolor Excitation and Förster Resonance Energy Transfer Measurements
    J. Phys. Chem. A, Vol. 110, No. 9. (9 March 2006), pp. 2979-2995.
    by C Eggeling, J Widengren, L Brand, J Schaffer, S Felekyan, CAM Seidel
    posted to photophysics photochemistry photobleaching fret by samjlord on 2008-06-16 19:13:06 as ** along with 1 group moernerlab
  • Photochromism of Diarylethene Single Molecules in Polymer Matrices
    J. Am. Chem. Soc., Vol. 129, No. 18. (9 May 2007), pp. 5932-5938.
    by T Fukaminato, T Umemoto, Y Iwata, S Yokojima, M Yoneyama, S Nakamura, M Irie
    posted to fret photophysics photoswitchable sms by samjlord on 2007-09-27 02:01:24 as **
  • Identification of an Orthogonal Peptide Binding Motif for Biarsenical Multiuse Affinity Probes
    Bioconjugate Chem. (15 June 2007)
    by B Chen, H Cao, P Yan, MU Mayer, TC Squier
    posted to bioconjugation fluorophores fret by samjlord on 2007-06-24 00:31:22 as read along with 1 group moernerlab
  • A Red Cy3-Based Biarsenical Fluorescent Probe Targeted to a Complementary Binding Peptide
    J. Am. Chem. Soc. (22 June 2007)
    by H Cao, Y Xiong, T Wang, B Chen, TC Squier, MU Mayer
    posted to bioconjugation fluorophores fret by samjlord on 2007-06-24 00:19:22 as read along with 1 group moernerlab
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