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タグ: enrichment [94 articles]

Recent papers classified by the tag enrichment.
  • Identification of transcriptional regulators using binding site enrichment analysis.
    In Silico Biol, Vol. 6, No. 6. (2006), pp. 531-544.
    by TM Kim, MH Jung
    posted to enrichment hnf4 mining motif by yevishere on 2008-01-03 23:14:06 as **** along with 1 person heliopais
  • Grouping Gene Ontology terms to improve the assessment of gene set enrichment in microarray data
    BMC Bioinformatics, Vol. 7 (03 October 2006), 426.
    by Alex Lewin, Ian C Grieve
    posted to enrichment go ontology systems_biology by uprock on 2006-10-30 02:16:30 as ** along with 5 people and 2 groups ealloza giovanni jdiggans heliopais waghsk BioinfoCIPF GeschwindLab
  • notes Effects of different environmental enrichment devices on cage stereotypies and autoaggression in captive cynomolgus monkeys.
    J Med Primatol, Vol. 17, No. 5. (1988), pp. 257-269.
    by CE Bryant, NM Rupniak, SD Iversen
    posted to enrichment monkeys nocopy stereotypy by tobymart on 2005-08-02 01:06:46 as ***
  • notes The influence of cage size and environmental enrichment on the development of stereotypies in bank voles (Clethrionomys glareolus)
    Behavioural Processes, Vol. 14, No. 2. (April 1987), pp. 155-173.
    by FO Odberg
    posted to cage_size enrichment hardcopy stereotypy voles by tobymart on 2005-08-01 22:01:38 as read
  • notes Scientific approaches to enrichment and stereotypies in zoo animals: what's been done and where should we go next?
    Zoo Biology (22 July 2005)
    by Ronald R Swaisgood, David J Shepherdson
    posted to enrichment pacing review stereotypy by tobymart on 2005-08-01 06:45:03 as read
  • Development of spontaneous stereotyped behavior in deer mice: Effects of early and late exposure to a more complex environment
    Developmental Psychobiology, Vol. 37, No. 2. (17 August 2000), pp. 100-108.
    by Susan B Powell, Howard A Newman, Tayloe A Mcdonald, Paul Bugenhagen, Mark H Lewis
    posted to enrichment mice stereotypy by tobymart on 2005-08-02 07:01:51 as *** along with 1 person CannonKarpiakLab
  • notes Effect of space allowance and earthen flooring on behaviour of farmed blue foxes
    Acta ethologica, Vol. 4, No. 1. (2001), pp. 11-21.
    by Hannu T Korhonen, Lauri Jauhiainen, Paavo Niemelã¤
    posted to cage_size enrichment foxes pacing stereotypy by tobymart on 2005-08-02 06:14:38 as read
  • Hierarchical Growth and Cosmic Star Formation: Enrichment, Outflows and Supernova Rates
    (7 Sep 2005)
    by Frederic Daigne, Keith A Olive, Joe Silk, Felix Stoehr, Elisabeth Vangioni
    posted to simulation sfr icm enrichment cosmology by slaanco on 2008-07-10 17:02:49 as **
  • Metal enrichment processes
    (7 Jan 2008)
    by S Schindler, A Diaferio
    posted to sabine review metal icm enrichment by slaanco on 2008-07-10 15:54:43 as **
  • From the Cover: Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
    PNAS, Vol. 102, No. 43. (25 October 2005), pp. 15545-15550.
    by Aravind Subramanian, Pablo Tamayo, Vamsi K Mootha, Sayan Mukherjee, Benjamin L Ebert, Michael A Gillette, Amanda Paulovich, Scott L Pomeroy, Todd R Golub, Eric S Lander, Jill P Mesirov
    posted to enrichment genomics pathway-analysis statistics by shikin on 2007-12-14 13:01:24 as ** along with 20 people and 4 groups ellakat ihpark srp33 dragonrez jfr balajis maryee xwbcn hpiwowar aviad_work ealloza jdiggans jeremymiller frohike hawkeyehammer schuylrp natstreet heliopais waghsk roys Bioinformatics BioinfoCIPF GeschwindLab Indigene
  • PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes.
    Nat Genet, Vol. 34, No. 3. (July 2003), pp. 267-273.
    by VK Mootha, CM Lindgren, KF Eriksson, A Subramanian, S Sihag, J Lehar, P Puigserver, E Carlsson, M Ridderstråle, E Laurila, N Houstis, MJ Daly, N Patterson, JP Mesirov, TR Golub, P Tamayo, B Spiegelman, ES Lander, JN Hirschhorn, D Altshuler, LC Groop
    posted to enrichment genomics pathway-analysis statistics by shikin on 2007-12-14 13:00:26 as *** along with 6 people and 2 groups heliopais magusina dragonrez maryee ealloza giovanni BioinfoCIPF GeschwindLab
  • A systems biology approach to prediction of oncogenes and molecular perturbation targets in B-cell lymphomas
    Mol Syst Biol, Vol. 4 (12 February 2008)
    by Kartik M Mani, Celine Lefebvre, Kai Wang, Wei K Lim, Katia Basso, Riccardo Dalla-Favera, Andrea Califano
    posted to cancer enrichment genomics systems_biology by shikin on 2008-02-15 15:06:57 as read along with 4 people dragonrez tmmurali ealloza dap5087
  • Behavioral effects of environmental enrichment on harbor seals (
    Zoo Biology, Vol. 21, No. 4. (10 July 2002), pp. 375-387.
    by Sue A Hunter, Monika S Bay, Michele L Martin, Jeff S Hatfield
    posted to enrichment by shepherdsond on 2005-07-01 03:25:29 as ** along with 1 person tobymart
  • What free-ranging animals do at the zoo: a study of the behavior and habitat use of opossums (
    Zoo Biology, Vol. 24, No. 3. (12 May 2005), pp. 197-213.
    by Luke J Harmon, Karen Bauman, Matt Mccloud, John Parks, Shannon Howell, Jonathan B Losos
    posted to enrichment by shepherdsond on 2005-07-01 03:14:27 as **
  • Enrichment as Categorical Delooping I: Enrichment Over Iterated Monoidal Categories
    (2003)
    by S Forcey
    posted to category delooping enrichment iterated monoidal by scis0000001 on 2006-09-22 09:47:13 as **
  • Statistical concerns about the GSEA procedure.
    Nat Genet, Vol. 36, No. 7. (July 2004)
    by D Damian, M Gorfine
    posted to enrichment expression gene gsea microarray set by schuylrp on 2007-08-08 19:23:55 as ** along with 2 people and 1 group heliopais ealloza BioinfoCIPF
  • Gene Set Enrichment Analysis (GSEA) for Interpreting Gene Expression Profiles
    Current Bioinformatics, Vol. 2, No. 2. (May 2007), pp. 133-137.
    by Shi, Jing, Walker, G Michael
    posted to enrichment expression gene gsea microarray by schuylrp on 2007-08-10 18:34:32 as ** along with 2 people giovenko kengg
  • FunSpec: a web-based cluster interpreter for yeast.
    BMC Bioinformatics, Vol. 3, No. 1. (13 November 2002)
    by MD Robinson, J Grigull, N Mohammad, TR Hughes
    posted to yeast web-tool enrichment by saket on 2008-06-24 19:01:10 as ** along with 2 people ellakat dragonrez
  • Unsteady soil erosion due to rainfall impact: a model of sediment sorting on the hillslope
    Journal of Hydrology, Vol. 220, No. 3-4. (9 September 1999), pp. 115-128.
    by PB Hairsine, GC Sander, CW Rose, Parlange, WL Hogarth, I Lisle, H Rouhipour
    posted to enrichment multi-class rainfall soil-erosion by peterheng on 2007-11-15 19:54:05 as read
  • Water Erosion Processes and the Enrichment of Sorbed Pesticides. Part 2. Enrichment Under Rainfall Dominated Erosion Process
    Journal of Environmental Management, Vol. 37, No. 1. (January 1993), pp. 37-50.
    by H Ghadiri, CW Rose
    posted to enrichment pesticides rainfall soil-erosion sorption by peterheng on 2008-01-04 18:31:05 as ***
  • Water Erosion Processes and the Enrichment of Sorbed Pesticides. Part 1. Enrichment Mechanisms and the Degradation of Applied Pesticides
    Journal of Environmental Management, Vol. 37, No. 1. (January 1993), pp. 23-35.
    by H Ghadiri, CW Rose
    posted to enrichment pesticides soil-erosion sorption by peterheng on 2008-01-04 18:29:58 as ***
  • Virtual screening using protein-ligand docking: avoiding artificial enrichment.
    J Chem Inf Comput Sci, Vol. 44, No. 3. (n 2004), pp. 793-806.
    by ML Verdonk, V Berdini, MJ Hartshorn, WT Mooij, CW Murray, RD Taylor, P Watson
    posted to docking enrichment gold by peprovy on 2007-06-05 15:30:44 as read along with 3 people and 2 groups BragilMassoud nachtalp sangeetha Bioinformatics insilicodrug
  • Sweetening WORDNET with DOLCE
    AI Mag., Vol. 24, No. 3. (September 2003), pp. 13-24.
    by Aldo Gangemi, Nicola Guarino, Claudio Masolo, Alessandro Oltramari
    posted to enrichment linguistic ontology semantic by kabs_v on 2007-03-20 11:18:57 as ** along with 3 people ianturton RafG oconnoat
  • ProbCD: enrichment analysis accounting for categorization uncertainty
    BMC Bioinformatics, Vol. 8, No. 1. (2007)
    by Ricardo Vencio, Ilya Shmulevich
    posted to enrichment microarray by heliopais on 2007-10-13 07:45:26 as *** along with 2 people and 1 group sobolevnrm barriot baker-group
  • notes Environmental enrichment promotes improved spatial abilities and enhanced dendritic growth in the rat.
    Behav Brain Res, Vol. 163, No. 1. (30 August 2005), pp. 78-90.
    by MG Leggio, L Mandolesi, F Federico, F Spirito, B Ricci, F Gelfo, L Petrosini
    posted to enrichment environmental by hattoro on 2006-06-14 11:59:49 as ***
  • Analysis of sample set enrichment scores: assaying the enrichment of sets of genes for individual samples in genome-wide expression profiles.
    Bioinformatics, Vol. 22, No. 14. (15 July 2006)
    by E Edelman, A Porrello, J Guinney, B Balakumaran, A Bild, PG Febbo, S Mukherjee
    posted to enrichment gsea microarray pathway sample by frohike to the group Bioinformatics on 2008-04-01 10:19:18 as ** along with 5 people srp33 dragonrez jfr heliopais barriot
  • Enrichment planting in overexploited subtropical forests of the Paranaense region of Misiones, Argentina
    Forest Ecology and Management, Vol. 99, No. 1-2. (December 1997), pp. 237-246.
    by Florencia Montagnini, Beatriz Eibl, Luis Grance, Domingo Maiocco, Diego Nozzi
    posted to argentina enrichment planting tocheck by flr to the group biodiversity_conservation on 2006-04-21 10:41:17 as **
  • Ontology Enrichment and Indexing Process
    by E Desmontils, C Jacquin, L Simon
    posted to enrichment by gridinoc on 2006-10-14 07:16:55 as ** along with 3 people and 2 groups ville xxc pdxfic Blog_and_Wiki_Research Wikipedia
  • Serum lysozyme activity in children with acute leukemia.
    European Journal of Pediatrics, Vol. 127, No. 4. (20 April 1978), pp. 263-268.
    by D Bratlid, PJ Moe
    posted to classification enrichment leukemia thesis by ggrot on 2005-04-18 17:37:32 as *
  • Support vector machine classification and validation of cancer tissue samples using microarray expression data.
    Bioinformatics, Vol. 16, No. 10. (October 2000), pp. 906-914.
    by TS Furey, N Cristianini, N Duffy, DW Bednarski, M Schummer, D Haussler
    posted to classification enrichment microarray thesis by ggrot on 2005-04-26 05:49:53 as * along with 3 people pliz srp33 tvjagan
  • Interleukin-6 undergoes transition from paracrine growth inhibitor to autocrine stimulator during human melanoma progression.
    The Journal of Cell Biology, Vol. 120, No. 5. (March 1993), pp. 1281-1288.
    by C Lu, RS Kerbel
    posted to enrichment thesis by ggrot on 2005-04-25 04:08:14 as *
  • Chromosome abnormalities in malignant lymphoma in patients from Saitama.
    Cancer Research, Vol. 47, No. 24 Pt 1. (15 December 1987), pp. 6767-6775.
    by N Maseki, Y Kaneko, M Sakurai, M Kurihara, K Sampi, K Shimamura, S Takayama
    posted to enrichment lymphoma thesis by ggrot on 2005-04-25 04:02:25 as *
  • Differential expression of GLUT12 in breast cancer and normal breast tissue.
    Cancer Letters, Vol. 193, No. 2. (25 April 2003), pp. 225-233.
    by S Rogers, SE Docherty, JL Slavin, MA Henderson, JD Best
    posted to enrichment thesis by ggrot on 2005-04-25 03:29:16 as *
  • Adult precursor-B acute lymphoblastic leukemia with translocations involving chromosome band 19p13 is associated with poor prognosis.
    Cancer Genetics and Cytogenetics, Vol. 109, No. 1. (February 1999), pp. 58-65.
    by HS Khalidi, MR O'Donnell, ML Slovak, DA Arber
    posted to enrichment leukemia thesis by ggrot on 2005-04-25 03:09:33 as read
  • Primer of Biostatistics
    (05 November 2001)
    by Stanton A Glantz
    posted to enrichment thesis by ggrot on 2005-05-26 22:23:48 as **
  • Heterogeneous nuclear ribonucleoprotein A1 binds to the transcription-regulatory region of mouse hepatitis virus RNA.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 94, No. 18. (2 September 1997), pp. 9544-9549.
    by HP Li, X Zhang, R Duncan, L Comai, MM Lai
    posted to enrichment thesis by ggrot on 2005-04-20 19:54:33 as read
  • Role of intermediate filaments in migration, invasion and metastasis.
    Cancer Metastasis Rev, Vol. 15, No. 4. (December 1996), pp. 507-525.
    by MJ Hendrix, EA Seftor, YW Chu, KT Trevor, RE Seftor
    posted to enrichment thesis by ggrot on 2005-04-20 19:28:32 as *
  • Galectin-1 modulates human glioblastoma cell migration into the brain through modifications to the actin cytoskeleton and levels of expression of small GTPases.
    Journal of Neuropathology and Experimental Neurology, Vol. 61, No. 7. (July 2002), pp. 585-596.
    by I Camby, N Belot, F Lefranc, N Sadeghi, Yd de Launoit, H Kaltner, S Musette, F Darro, A Danguy, I Salmon, HJ Gabius, R Kiss
    posted to thesis enrichment by ggrot on 2005-04-20 18:24:01 as *
  • The RING heterodimer BRCA1-BARD1 is a ubiquitin ligase inactivated by a breast cancer-derived mutation.
    Journal of Biological Chemistry, Vol. 276, No. 18. (4 May 2001), pp. 14537-14540.
    by R Hashizume, M Fukuda, I Maeda, H Nishikawa, D Oyake, Y Yabuki, H Ogata, T Ohta
    posted to cancer enrichment thesis by ggrot on 2005-04-20 17:57:10 as *
  • Ferritin---a tumor marker in myeloid leukemia.
    Cancer Detection and Prevention, Vol. 8, No. 1-2. (1985), pp. 297-302.
    by E Aulbert, CG Schmidt
    posted to cancer enrichment leukemia thesis by ggrot on 2005-04-18 18:11:43 as *
  • Serum ferritin--a tumor marker in malignant lymphomas
    Onkologie, Vol. 13, No. 2. (April 1990), pp. 102-108.
    by E Aulbert, O Steffens
    posted to cancer enrichment lymphoma thesis by ggrot on 2005-04-18 18:11:11 as *
  • A novel, nuclear pore-associated, widely distributed molecule overexpressed in oncogenesis and development.
    American Journal of Pathology, Vol. 157, No. 5. (November 2000), pp. 1605-1613.
    by VE Gould, N Martinez, A Orucevic, J Schneider, A Alonso
    posted to enrichment lymphoma thesis by ggrot on 2005-04-18 18:10:39 as *
  • Cell cycle deregulation in B-cell lymphomas.
    Blood, Vol. 101, No. 4. (15 February 2003), pp. 1220-1235.
    by M Sánchez-Beato, A Sánchez-Aguilera, MA Piris
    posted to enrichment lymphoma thesis by ggrot on 2005-04-18 18:10:00 as *
  • Monocyte chemotaxis in leukemia patients.
    The Journal of Laboratory and Clinical Medicine, Vol. 95, No. 4. (April 1980), pp. 609-615.
    by DA Norris, WL Weston, DG Tubergen, B Rose, LF Odom
    posted to cancer enrichment leukemia thesis by ggrot on 2005-04-18 18:08:43 as *
  • In vitro transcription of human T-cell leukemia virus type 1 is RNA polymerase II dependent.
    The Journal of Virology, Vol. 71, No. 3. (March 1997), pp. 2577-2580.
    by BA Lenzmeier, JK Nyborg
    posted to enrichment thesis by ggrot on 2005-04-18 18:08:00 as *
  • Multiclass cancer diagnosis using tumor gene expression signatures.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 98, No. 26. (18 December 2001), pp. 15149-15154.
    by S Ramaswamy, P Tamayo, R Rifkin, S Mukherjee, CH Yeang, M Angelo, C Ladd, M Reich, E Latulippe, JP Mesirov, T Poggio, W Gerald, M Loda, ES Lander, TR Golub
    posted to cancer classification dataset enrichment microarray thesis by ggrot on 2005-04-18 18:06:47 as ** along with 3 people and 1 group dragonrez archroad giovanni GeschwindLab
  • Linking oncogenic pathways with therapeutic opportunities
    Nature Reviews Cancer, Vol. 6, No. 9. (17 August 2006), pp. 735-741.
    by Andrea H Bild, Anil Potti, Joseph R Nevins
    posted to analysis cancer enrichment oncogenic oncology pathways by frohike on 2008-01-31 09:34:24 as *** along with 3 people srp33 aviad_work jackjackjjj
  • Genome Expression Pathway Analysis Tool - Analysis and visualization of microarray gene expression data under genomic, proteomic and metabolic context
    BMC Bioinformatics, Vol. 8 (02 June 2007), 179.
    by Markus Weniger, Julia C Engelmann, Joerg Schultz
    posted to annotation enrichment microarray pathway by frohike on 2008-02-01 15:29:38 as ** along with 5 people and 1 group jyuh jfr rdiaz ealloza fmenolascina BioinfoCIPF
  • TERT Promotes Epithelial Proliferation through Transcriptional Control of a Myc- and Wnt-Related Developmental Program
    PLoS Genetics, Vol. 4, No. 1. (1 January 2008), e10.
    by Jinkuk Choi, Lucinda K Southworth, Kavita Y Sarin, Andrew S Venteicher, Wenxiu Ma, Woody Chang, Peggie Cheung, Sohee Jun, Maja K Artandi, Naman Shah, Stuart K Kim, Steven E Artandi
    posted to enrichment expression gene myc tert wnt by fpattyn on 2008-02-19 13:33:18 as **
  • How to decide which are the most pertinent overly-represented features during gene set enrichment analysis
    BMC Bioinformatics, Vol. 8, No. 1. (2007)
    by Roland Barriot, David Sherman, Isabelle Dutour
    posted to set gene enrichment analysis by Eugene on 2008-05-17 19:33:14 as read along with 8 people and 2 groups AlexanderPico jfr heliopais jyuh ealloza barriot waghsk mcgannd Bioinformatics BioinfoCIPF
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