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タグ: cytochrome [64 articles]

Recent papers classified by the tag cytochrome.
  • Time-resolved electrometric and optical studies on cytochrome bd suggest a mechanism of electron-proton coupling in the di-heme active site.
    Proc Natl Acad Sci U S A (22 February 2005)
    by Ilya Belevich, Vitaliy B B Borisov, Jie Zhang, Ke Yang, Alexander A A Konstantinov, Robert B B Gennis, Michael I I Verkhovsky
    posted to cytochrome by Terkko on 2005-03-03 12:44:50 as **
  • Multiple Sequential Steps Involved in the Binding of Inhibitors to Cytochrome P450 3A4
    J. Biol. Chem., Vol. 282, No. 9. (2 March 2007), pp. 6863-6874.
    by Emre M Isin, Peter F Guengerich
    posted to 3a4 cytochrome by superpyrin on 2007-05-31 14:54:18 as ****
  • Evaluation of probe drugs and pharmacokinetic metrics for CYP2D6 phenotyping
    European Journal of Clinical Pharmacology, Vol. 63, No. 4. (April 2007), pp. 321-333.
    by Frank, , Jaehde, , Fuhr,
    posted to 2d6 cytochrome by superpyrin on 2007-06-10 15:46:02 as **
  • Free energies of binding of R- and S-propranolol to wild-type and F483A mutant cytochrome P450 2D6 from molecular dynamics simulations.
    Eur Biophys J (27 February 2007)
    by Chris de Graaf, Chris Oostenbrink, Peter H Keizers, Barbara M van Vugt-Lussenburg, Jan N Commandeur, Nico P Vermeulen
    posted to 2d6 cytochrome by superpyrin on 2007-06-10 15:41:35 as ***
  • In Silico Prediction of Cytochrome P450 2D6 and 3A4 Inhibition Using Gaussian Kernel Weighted k-Nearest Neighbor and Extended Connectivity Fingerprints, Including Structural Fragment Analysis of Inhibitors versus Noninhibitors
    J. Med. Chem., Vol. 50, No. 3. (8 February 2007), pp. 501-511.
    by BF Jensen, C Vind, SB Padkjar, PB Brockhoff, HHF Refsgaard
    posted to p450 cytochrome admet 3a4 2d6 by superpyrin on 2008-06-19 14:38:30 as **
  • Development of CYP3A4 Inhibition Models: Comparisons of Machine-Learning Techniques and Molecular Descriptors
    J Biomol Screen, Vol. 10, No. 3. (1 April 2005), pp. 197-205.
    by Rieko Arimoto, Madhu-Ashni Prasad, Eric M Gifford
    posted to 3a4 cytochrome by superpyrin on 2007-05-31 15:16:16 as ***
  • KOHONEN MAPS FOR PREDICTION OF BINDING TO HUMAN CYTOCHROME P450 3A4
    Drug Metab Dispos, Vol. 32, No. 10. (1 October 2004), pp. 1183-1189.
    by Konstantin V Balakin, Sean Ekins, Andrey Bugrim, Yan A Ivanenkov, Dmitry Korolev, Yuri V Nikolsky, Andrey V Skorenko, Andrey A Ivashchenko, Nikolay P Savchuk, Tatiana Nikolskaya
    posted to 3a4 cytochrome by superpyrin on 2007-05-31 15:09:53 as ** along with 1 person girschick
  • Drugs behave as substrates, inhibitors and inducers of human cytochrome P450 3A4.
    Current drug metabolism, Vol. 9, No. 4. (May 2008), pp. 310-322.
    by SF Zhou
    posted to p450 induction cytochrome 3a4 by superpyrin on 2008-06-05 11:20:19 as **
  • Kinetics and Thermodynamics of Ligand Binding by Cytochrome P450 3A4
    J. Biol. Chem., Vol. 281, No. 14. (7 April 2006), pp. 9127-9136.
    by Emre M Isin, Peter F Guengerich
    posted to 3a4 cytochrome by superpyrin on 2007-05-31 15:07:54 as *** along with 1 person Tominator
  • The Structure of Human Microsomal Cytochrome P450 3A4 Determined by X-ray Crystallography to 2.05-A Resolution
    J. Biol. Chem., Vol. 279, No. 37. (10 September 2004), pp. 38091-38094.
    by Jason K Yano, Michael R Wester, Guillaume A Schoch, Keith J Griffin, David C Stout, Eric F Johnson
    posted to 3a4 cytochrome by superpyrin on 2007-05-31 15:04:10 as ****
  • Evolution and function of the NR1I nuclear hormone receptor subfamily (VDR, PXR, and CAR) with respect to metabolism of xenobiotics and endogenous compounds.
    Current drug metabolism, Vol. 7, No. 4. (May 2006), pp. 349-365.
    by EJ Reschly, MD Krasowski
    posted to pxr p450 induction cytochrome admet by superpyrin on 2008-06-01 07:56:27 as **
  • Crystal Structures of Human Cytochrome P450 3A4 Bound to Metyrapone and Progesterone
    Science, Vol. 305, No. 5684. (30 July 2004), pp. 683-686.
    by Pamela A Williams, Jose Cosme, Dijana M Vinkovic, Alison Ward, Hayley C Angove, Philip J Day, Clemens Vonrhein, Ian J Tickle, Harren Jhoti
    posted to 3a4 cytochrome by superpyrin on 2007-05-31 15:01:19 as ****
  • Mechanism-based inactivation of cytochrome p450 enzymes: chemical mechanisms, structure-activity relationships and relationship to clinical drug-drug interactions and idiosyncratic adverse drug reactions.
    Curr Drug Metab, Vol. 8, No. 5. (June 2007), pp. 407-447.
    by AS Kalgutkar, RS Obach, TS Maurer
    posted to cytochrome by superpyrin on 2007-07-08 10:33:16 as **
  • Classification of highly unbalanced CYP450 data of drugs using cost sensitive machine learning techniques.
    J Chem Inf Model, Vol. 47, No. 1. (b 2007), pp. 92-103.
    by T Eitrich, A Kless, C Druska, W Meyer, J Grotendorst
    posted to 2d6 cytochrome by superpyrin on 2007-06-10 15:48:20 as **
  • Ligand-Based Models for the Isoform Specificity of Cytochrome P450 3A4, 2D6, and 2C9 Substrates.
    J Chem Inf Model (3 July 2007)
    by Lothar Terfloth, Bruno Bienfait, Johann Gasteiger
    posted to 2d6 3a4 cytochrome by superpyrin on 2007-07-08 10:30:07 as ** along with 1 person girschick
  • IN SILICO PREDICTION OF DRUG BINDING TO CYP2D6: IDENTIFICATION OF A NEW METABOLITE OF METOCLOPRAMIDE
    Drug Metab Dispos, Vol. 34, No. 8. (1 August 2006), pp. 1386-1392.
    by Jinglei Yu, Mark J Paine, Jean-Didier Marechal, Carol A Kemp, Clive J Ward, Simon Brown, Michael J Sutcliffe, Gordon C Roberts, Elaine M Rankin, Roland C Wolf
    posted to 2d6 cytochrome by superpyrin on 2007-07-17 07:55:41 as ** along with 1 person girschick
  • Cytochrome p450 in silico: an integrative modeling approach.
    J Med Chem, Vol. 48, No. 8. (21 April 2005), pp. 2725-2755.
    by C de Graaf, NP Vermeulen, KA Feenstra
    posted to cytochrome p450 by superpyrin on 2007-07-17 13:18:46 as *** along with 1 person feenstra
  • Cytochromes P450, Drugs, and Diseases
    Mol. Interv., Vol. 3, No. 4. (1 June 2003), pp. 194-204.
    by Peter F Guengerich
    posted to cytochrome by superpyrin on 2007-05-31 15:25:59 as ***
  • Predictive Models of CYP3A4 Heteroactivation: In Vitro-in Vivo Scaling and Pharmacophore Modeling
    J Pharmacol Exp Ther, Vol. 312, No. 3. (1 March 2005), pp. 926-937.
    by Ann-Charlotte Egnell, Brian J Houston, Scott C Boyer
    posted to 3a4 cytochrome by superpyrin on 2007-05-31 15:21:03 as ***
  • P450ome of the white rot fungus Phanerochaete chrysosporium: structure, evolution and regulation of expression of genomic P450 clusters.
    Biochem Soc Trans, Vol. 34, No. Pt 6. (December 2006), pp. 1165-1169.
    by JS Yadav, H Doddapaneni, V Subramanian
    posted to cytochrome p450 phanerochaete_chrysosporium by stajich on 2007-02-19 16:44:10 as ** along with 1 person GustavoLacerda
  • Outer Membrane c-Type Cytochromes Required for Fe(III) and Mn(IV) Oxide Reduction in Geobacter sulfurreducens
    Appl. Environ. Microbiol., Vol. 71, No. 12. (1 December 2005), pp. 8634-8641.
    by T Mehta, MV Coppi, SE Childers, DR Lovley
    posted to cytochrome geobacter by srfairclough on 2007-04-14 22:11:56 as ***
  • Conserved lipid-binding sites in membrane proteins: a focus on cytochrome c oxidase
    Current Opinion in Structural Biology, Vol. 17, No. 4. (August 2007), pp. 444-450.
    by Ling Qin, Martyn A Sharpe, Michael R Garavito, Shelagh Ferguson-Miller
    posted to cytochrome membranes proteins by softsimu on 2008-01-31 15:57:31 as **
  • Kinetics of integrated electron transfer in the mitochondrial respiratory chain: random collisions vs. solid state electron channeling
    Am J Physiol Cell Physiol, Vol. 292, No. 4. (1 April 2007), pp. C1221-1239.
    by Giorgio Lenaz, Maria L Genova
    posted to cardiolipin cytochrome mitochondria by softsimu on 2008-01-28 14:51:44 as **
  • Cardiolipin Is Not Required for Bax-mediated Cytochrome c Release from Yeast Mitochondria
    J. Biol. Chem., Vol. 279, No. 2. (9 January 2004), pp. 1100-1107.
    by Suzanne L Iverson, Mari Enoksson, Vladimir Gogvadze, Martin Ott, Sten Orrenius
    posted to cytochrome by softsimu on 2008-01-28 14:50:18 as **
  • Phospholipase Digestion of Bound Cardiolipin Reversibly Inactivates Bovine Cytochrome bc1
    Biochemistry, Vol. 38, No. 28. (13 July 1999), pp. 9031-9038.
    by B Gomez, NC Robinson
    posted to cardiolipin cytochrome by softsimu on 2008-01-28 14:45:13 as **
  • Mechanisms of cytochrome c release from mitochondria
    Cell Death and Differentiation, Vol. aop, No. current.
    by C Garrido, L Galluzzi, M Brunet, PE Puig, C Didelot, G Kroemer
    posted to cardiolipin cytochrome mitochondria by softsimu on 2008-04-12 20:28:46 as ** along with 1 person laurabailey
  • Cytochrome c Interaction with Cardiolipin/Phosphatidylcholine Model Membranes: Effect of Cardiolipin Protonation
    Biophys. J., Vol. 90, No. 11. (1 June 2006), pp. 4093-4103.
    by Galyna P Gorbenko, Julian G Molotkovsky, Paavo K Kinnunen
    posted to cardiolipin cytochrome by softsimu on 2008-01-28 16:30:32 as **
  • Ratiometric and fluorescence-lifetime-based biosensors incorporating cytochrome c' and the detection of extra- and intracellular macrophage nitric oxide
    Anal. Chem., Vol. 71, No. 9. (1999), pp. 1767-1772.
    by SLR Barker, HA Clark, SF Swallen, R Kopelman, AW Tsang, JA Swanson
    posted to c cytochrome nitric oxide by silverplasma on 2007-09-20 22:25:49 as ** along with 1 person and 1 group kopelman Kopelman_Group
  • Coevolutionary patterns in cytochrome C oxidase subunit I depend on structural and functional context.
    J Mol Evol, Vol. 65, No. 5. (November 2007), pp. 485-495.
    by ZO Wang, DD Pollock
    posted to c coevolution cytochrome oxidase by rrhudson on 2007-12-04 23:42:45 as *** along with 1 person mingzhi
  • Facial Control of Nanoparticle Binding to Cytochrome c
    J. Am. Chem. Soc., Vol. 129, No. 10. (14 March 2007), pp. 2732-2733.
    by H Bayraktar, CC You, VM Rotello, MJ Knapp
    posted to binding c cytochrome nanoparticles orientation by rodney on 2007-11-05 20:23:40 as **
  • Molecular evolution of the cytochrome c oxidase subunit 5A gene in primates
    BMC Evolutionary Biology, Vol. 8, No. 1. (2008)
    by Monica Uddin, Juan Opzao, Derek Wildman, Chet Sherwood, Patrick Hof, Morris Goodman, Lawrence Grossman
    posted to cytochrome evolution primates by renatomilani on 2008-01-16 14:00:34 as **
  • A mutation of human cytochrome c enhances the intrinsic apoptotic pathway but causes only thrombocytopenia
    Nat Genet, Vol. 40, No. 4. (April 2008), pp. 387-389.
    by Ian M Morison, Cramer, Emma J Cheesman, Pak L Cheong, Andrew J Holyoake, Serge Fichelson, Robert J Weeks, Alexandra Lo, Stefan M Davies, Sigurd M Wilbanks, Robert D Fagerlund, Mathew W Ludgate, da Silva, Melanie S Coker, Nicholas A Bockett, Gillian Hughes, Diana A Pippig, Mark P Smith, Claude Capron, Elizabeth C Ledgerwood
    posted to cell cytochrome death pathway by renatomilani on 2008-03-27 14:40:49 as **
  • Re-examining the role of cytochrome c in cell death
    Nat Genet, Vol. 40, No. 4. (April 2008), pp. 379-380.
    by Eric Solary, Fabrizio Giordanetto, Guido Kroemer
    posted to cell cytochrome death by renatomilani on 2008-03-27 14:38:55 as ** along with 1 person carmenv
  • Prevention of leak in the proton pump of cytochrome c oxidase
    Biochimica et Biophysica Acta (BBA) - Bioenergetics, Vol. In Press, Accepted Manuscript
    by Ville R Kaila, Michael Verkhovsky, Gerhard Hummer, Marten Wikstrom
    posted to cytochrome grandient mitochondria oxidase proton by paulschlesinger on 2008-04-03 22:58:04 as ** along with 1 person Terkko
  • Cytochrome c assembly: A tale of ever increasing variation and mystery?
    Biochimica et Biophysica Acta (BBA) - Bioenergetics, Vol. In Press, Accepted Manuscript
    by Stuart J Ferguson, Julie M Stevens, James W Allen, Ian Robertson
    posted to c cytochrome by paulschlesinger on 2008-04-03 22:53:51 as **
  • Insights into Cytochrome c−Cardiolipin Interaction. Role Played by Ionic Strength
    Biochemistry (10 June 2008)
    by Federica Sinibaldi, Laura Fiorucci, Antonella Patriarca, Rosaria Lauceri, Tommaso Ferri, Massimo Coletta, Roberto Santucci
    posted to sinibal08pdf membrane cytochrome c binding by paulschlesinger on 2008-06-11 01:30:52 as **
  • Mammalian liver cytochrome c is tyrosine-48 phosphorylated in vivo, inhibiting mitochondrial respiration
    Biochimica et Biophysica Acta (BBA) - Bioenergetics, Vol. In Press, Accepted Manuscript
    by Hong Yu, Icksoo Lee, Arthur R Salomon, Kebing Yu, Maik Hüttemann
    posted to phosphorylation metabolism cytochrome c apoptosis by paulschlesinger on 2008-04-26 00:14:03 as **
  • Mitochondrial Regulation of Caspase Activation by Cytochrome Oxidase and Tetramethylphenylenediamine via Cytosolic Cytochrome c Redox State
    J. Biol. Chem., Vol. 282, No. 43. (26 October 2007), pp. 31124-31130.
    by Vilmante Borutaite, Guy C Brown
    posted to apoptosis c caspase cytochrome redox state by paulschlesinger on 2007-10-19 18:50:21 as **
  • High affinity binding of Bcl-xL to cytochrome c: Possible relevance for interception of translocated cytochrome c in apoptosis
    Biochimica et Biophysica Acta (BBA) - Proteins & Proteomics, Vol. 1774, No. 11. (November 2007), pp. 1370-1379.
    by M Yadaiah, Nageswara P Rao, P Harish, Abani K Bhuyan
    posted to apoptosis bcl-2 binding c cytochrome family interactions by paulschlesinger on 2007-11-26 02:09:44 as **
  • Hypoxia induces apoptosis in human neuroblastoma SK-N-MC cells by caspase activation accompanying cytochrome c release from mitochondria
    FEBS Letters, Vol. 439, No. 1-2. (13 November 1998), pp. 168-172.
    by Runa Araya, Takashi Uehara, Yasuyuki Nomura
    posted to apoptosis c caspase cytochrome hypoxia mitochondria by olbrich on 2005-06-01 06:09:09 as read along with 1 group Duke_PSRL
  • Calcium-Dependent Heme Structure in the Reduced Forms of the Bacterial Cytochrome c Peroxidase from Paracoccus pantotrophus
    Biochemistry (29 April 2008)
    by Sofia R Pauleta, Yi Lu, Celia F Goodhew, Isabel Moura, Graham W Pettigrew, John A Shelnutt
    posted to structure peroxidase paracoccus haem cytochrome calcium by neils on 2008-04-29 09:21:09 as **
  • Membrane Tetraheme Cytochrome cm552 of the Ammonia-Oxidizing Nitrosomonas europaea: A Ubiquinone Reductase
    Biochemistry (28 May 2008)
    by Hyung J Kim, Anna Zatsman, Anup K Upadhyay, Mark Whittaker, David Bergmann, Michael P Hendrich, Alan B Hooper
    posted to nitrosomonas enzymology cytochrome cm552 biophysics by neils on 2008-05-28 08:18:11 as **
  • Transcriptional analysis of the nirS gene, encoding cytochrome cd1 nitrite reductase, of Paracoccus pantotrophus LMD 92.63.
    Microbiology (Reading, England), Vol. 146 ( Pt 2) (February 2000), pp. 509-516.
    by NF Saunders, SJ Ferguson, SC Baker
    posted to transcription reductase paracoccus nitrite nirs cytochrome by neils on 2008-05-11 10:23:18 as **
  • Cytochrome cd1 structure: unusual haem environments in a nitrite reductase and analysis of factors contributing to beta-propeller folds.
    Journal of molecular biology, Vol. 269, No. 3. (13 June 1997), pp. 440-455.
    by SC Baker, NF Saunders, AC Willis, SJ Ferguson, J Hajdu, V Fülöp
    posted to structure reductase protein nitrite haem cytochrome beta-propeller by neils on 2008-05-11 10:19:58 as **
  • Structural characterization of Paracoccus denitrificans cytochrome c peroxidase and assignment of the low and high potential heme sites.
    Biochemistry, Vol. 36, No. 26. (1 July 1997), pp. 7958-7966.
    by W Hu, G Van Driessche, B Devreese, CF Goodhew, DF McGinnity, N Saunders, V Fulop, GW Pettigrew, JJ Van Beeumen
    posted to potential peroxidase paracoccus haem cytochrome calcium by neils on 2008-05-11 10:19:23 as **
  • Disruption of the Pseudomonas aeruginosa dipZ gene, encoding a putative protein-disulfide reductase, leads to partial pleiotropic deficiency in c-type cytochrome biogenesis.
    Microbiology (Reading, England), Vol. 143 ( Pt 10) (October 1997), pp. 3111-3122.
    by MD Page, NF Saunders, SJ Ferguson
    posted to pseudomonas disulphide dipz cytochrome biogenesis by neils on 2008-05-11 10:17:57 as **
  • Presence and expression of terminal oxygen reductases in strictly anaerobic sulfate-reducing bacteria isolated from salt-marsh sediments.
    Anaerobe (25 March 2008)
    by Margarida Santana
    posted to oxygen n-damo cytochrome bd anaerobic by mjetten on 2008-06-03 19:08:31 as ** along with 1 group microbiology_nijmegen
  • Identification of Birds through DNA Barcodes.
    PLoS Biol, Vol. 2, No. 10. (October 2004)
    by PD Hebert, MY Stoeckle, TS Zemlak, CM Francis
    posted to c cytochrome dna variation by matzke on 2005-03-25 16:08:30 as **
  • Cytochrome c: Gene structure, homology and ancestral relationships
    Journal of Theoretical Biology, Vol. 152, No. 2. (21 September 1991), pp. 177-190.
    by Gordon C Mills
    posted to c clock cytochrome denton homology molecular phylogeny by matzke on 2006-12-01 04:16:43 as **
  • Early events in the folding of four-helix-bundle heme proteins
    PNAS, Vol. 102, No. 18. (3 May 2005), pp. 6315-6319.
    by Jasmin Faraone-Mennella, Harry B Gray, Jay R Winkler
    posted to b cytochrome by lucenacc on 2007-05-19 17:36:14 as **
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