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タグ: computational-biology [49 articles]

Recent papers classified by the tag computational-biology.
  • Cells as Computation
    Computational Methods in Systems Biology: First International Workshop, CMSB 2003, Rovereto, Italy, February 24-26, 2003. Proceedings (2003), pp. 1-3.
    by Amitai Regev, Ehud Shapiro
    posted to cellular computation computational-biology by scis0000001 on 2007-05-19 17:01:59 as **
  • Executable cell biology
    Nat Biotech, Vol. 25, No. 11. (November 2007), pp. 1239-1249.
    by Jasmin Fisher, Thomas A Henzinger
    posted to computational-biology modelling by neils on 2007-11-20 13:19:48 as ** along with 10 people and 2 groups tmmurali austin julius dbikard cjeans hpaces mircea tlandrain Doug jyuh csb_journal_club_public Centre de Recherches Interdisciplinaires
  • The model organism as a system: integrating 'omics' data sets
    Nature Reviews Molecular Cell Biology, Vol. 7, No. 3. (2006), pp. 198-210.
    by Andrew R Joyce, Bernhard
    posted to computational-biology by maburkitt on 2008-01-19 14:00:25 as ** along with 8 people balajis wnpx dgront mmt lh1 vietanh0 lylu csanford
  • Cancer: A Systems Biology disease
    Biosystems, Vol. 83, No. 2-3. (2006), pp. 81-90.
    by Jorrit J Hornberg, Frank J Bruggeman, Hans V Westerhoff, Jan Lankelma
    posted to computational-biology by maburkitt on 2008-01-11 10:30:42 as ** along with 4 people and 1 group Borelli julius fishtank frohike SysbioMPI-TCells
  • Can a biologist fix a radio?-Or, what I learned while studying apoptosis
    Cancer Cell, Vol. 2, No. 3. (September 2002), pp. 179-182.
    by Y Lazebnik
    posted to computational-biology by maburkitt on 2008-01-17 21:12:08 as ** along with 7 people aalibes dullhunk braingrind timflutre jrbanga urgi dap5087
  • Computational systems biology.
    Nature, Vol. 420, No. 6912. (14 November 2002), pp. 206-210.
    by H Kitano
    posted to computational-biology by maburkitt on 2008-01-17 21:14:14 as ** along with 14 people and 5 groups irenas rhem1224 lyongu eweaver wnpx ddahlem shivakumar3_14 os252 dgront mmt livingthingdan agileproteomics grahamc shikin dbk-lab TCR_Signaling SysbioMPI-TCells livingthing GeneGo
  • Systems biology and new technologies enable predictive and preventative medicine.
    Science, Vol. 306, No. 5696. (22 October 2004), pp. 640-643.
    by L Hood, JR Heath, ME Phelps, B Lin
    posted to computational-biology by maburkitt on 2008-01-11 10:11:34 as ** along with 6 people and 1 group wnpx cconboy shikin AlexanderPico megraw raiyar GeneGo
  • Reductionism Revisited
    Journal of Consciousness Studies, Vol. 11, No. 2. (2004), pp. 51-68.
    by A Scott
    posted to computational-biology by maburkitt on 2008-01-17 20:34:10 as **
  • High performance cDNA sequence analysis using grid technology
    Journal of Parallel and Distributed Computing, Vol. 66, No. 12. (December 2006), pp. 1482-1488.
    by GA Trombetti, Merelli, L Milanesi
    posted to computational-biology by maburkitt on 2008-01-14 12:48:09 as **
  • Digital biology: an emerging and promising discipline
    Trends in Biotechnology, Vol. 23, No. 3. (March 2005), pp. 113-117.
    by Richard W Morris, Carol A Bean, Gregory K Farber, Daniel Gallahan, Eric Jakobsson, Yuan Liu, Peter M Lyster, Grace C Peng, Fred S Roberts, Michael Twery
    posted to computational-biology by maburkitt on 2008-01-14 14:24:11 as ** along with 2 people BioGeek dullhunk
  • Verification and validation of simulation models
    (2005), pp. 130-143.
    by Robert G Sargent
    posted to computational-biology by maburkitt on 2008-01-15 08:30:11 as **
  • Systems biology: a brief overview.
    Science, Vol. 295, No. 5560. (1 March 2002), pp. 1662-1664.
    by H Kitano
    posted to computational-biology by maburkitt on 2008-01-11 10:15:49 as ** along with 21 people and 6 groups softsimu irenas Yanno Borelli wnpx biosv shivakumar3_14 dgront kehan cconboy mmt margaritis grahamc roland_ewald carmaus jdiezperezj mertnuhoglu edvin lenov soramame_0518 nsamways dbk-lab biodiversity_conservation Bioinformatics GrassBase dIEMoSIRIS MoSi-Rostock
  • Systems biology in drug discovery
    Nature Biotechnology, Vol. 22, No. 10. (October 2004), pp. 1253-1259.
    by Eugene C Butcher, Ellen L Berg, Eric J Kunkel
    posted to computational-biology by maburkitt on 2008-01-17 21:02:07 as ** along with 6 people and 3 groups Yanno rhem1224 tny karthikram mingzhi kengg TCR_Signaling Neoscientists SysbioMPI-TCells
  • Understanding diseases by mouse click: the promise and potential of computational approaches in Systems Biology
    Clinical & Experimental Immunology, Vol. 149, No. 3. (September 2007), pp. 424-429.
    by F Klauschen, BR Angermann, M Meier-Schellersheim
    posted to computational-biology by maburkitt on 2008-01-17 21:50:01 as ** along with 1 person and 2 groups dejori ic4 generif_paper
  • Linking a genetic defect to its cellular phenotype in a cardiac arrhythmia
    Nature, Vol. 400, No. 6744. (1999), pp. 566-569.
    by Colleen E Clancy, Yoram Rudy
    posted to computational-biology by maburkitt on 2008-01-17 21:04:31 as **
  • XDA: Breaking the Informatics Bottleneck in R&D
    Journal of the Association for Laboratory Automation, Vol. 10, No. 5. (October 2005), pp. 351-355.
    by Matthew Shanahan, Lawrence Arnstein
    posted to computational-biology by maburkitt on 2008-01-11 07:46:17 as **
  • The rise of computational biology.
    Nature Reviews Molecular Cell Biology, Vol. 3, No. 6. (June 2002), pp. 459-463.
    by D Noble
    posted to computational-biology by maburkitt on 2008-01-17 20:56:05 as ** along with 1 person dullhunk
  • Crop proteomics: Aim at sustainable agriculture of tomorrow
    PROTEOMICS, Vol. 7, No. 16. (2007), pp. 2976-2996.
    by Ghasem H Salekdeh, Setsuko Komatsu
    posted to computational-biology by maburkitt on 2008-01-17 21:23:49 as **
  • Functional genomics and proteomics as a foundation for systems biology.
    Briefings in Functional Genomics and Proteomics, Vol. 2, No. 3. (October 2003), pp. 175-184.
    by K Aggarwal, KH Lee
    posted to computational-biology by maburkitt on 2008-01-14 14:22:30 as ** along with 3 people holan biosv bootsy
  • Systems Biology: The Big Picture
    Environmental Health Perspectives, Vol. 112, No. 16. (November 2004), pp. A938-A943.
    by Angela Spivey
    posted to computational-biology by maburkitt on 2008-01-14 14:30:44 as **
  • Looking beyond the details: a rise in system-oriented approaches in genetics and molecular biology
    Current Genetics, Vol. 41, No. 1. (1 April 2002), pp. 1-10.
    by Hiroaki Kitano
    posted to computational-biology by maburkitt on 2008-01-15 13:44:46 as **
  • Grids in bioinformatics and computational biology
    Journal of Parallel and Distributed Computing, Vol. 66, No. 12. (December 2006), 1481.
    by Elghazali Talbi, Albert Zomaya
    posted to computational-biology by maburkitt on 2008-01-11 07:40:41 as **
  • GENETICS: Getting Closer to the Whole Picture
    Science, Vol. 316, No. 5824. (27 April 2007), pp. 550-551.
    by Uwe Sauer, Matthias Heinemann, Nicola Zamboni
    posted to computational-biology by maburkitt on 2008-01-11 13:34:18 as ** along with 2 people dayjm edvin
  • Integrating `omic' information: a bridge between genomics and systems biology
    Trends in Genetics, Vol. 19, No. 10. (October 2003), pp. 551-560.
    by Hui Ge, Albertha J Walhout, Marc Vidal
    posted to computational-biology by maburkitt on 2008-01-15 07:34:11 as ** along with 1 person maralena
  • Agent-based computational modeling of wounded epithelial cell monolayers
    Transactions on Nanobioscience, Vol. 3, No. 3. (2004), pp. 153-163.
    by DC Walker, G Hill, SM Wood, RH Smallwood, J Southgate
    posted to computational-biology by maburkitt on 2008-01-19 11:13:22 as **
  • A computational approach to animal breeding
    Journal of Theoretical Biology, Vol. 244, No. 3. (7 February 2007), pp. 433-439.
    by Tanya Y Berger-Wolf, Cristopher Moore, Jared Saia
    posted to computational-biology by maburkitt on 2008-01-11 07:38:04 as **
  • Modeling the Heart--from Genes to Cells to the Whole Organ
    Science, Vol. 295, No. 5560. (1 March 2002), pp. 1678-1682.
    by Denis Noble
    posted to computational-biology by maburkitt on 2008-01-15 13:32:42 as ** along with 3 people and 1 group brocktice eweaver chihchun_chen TulaneCEP
  • A Dictionary of Biology (Oxford Paperback Reference)
    (30 September 2004)
    edited by Robert Hine, Elizabeth Martin
    posted to computational-biology by maburkitt on 2008-01-17 20:40:25 as **
  • An expository on verification and validation of simulation models
    (1985), pp. 15-22.
    by Robert G Sargent
    posted to computational-biology by maburkitt on 2008-01-15 08:59:15 as **
  • The Diploid Genome Sequence of an Individual Human
    PLoS Biology, Vol. 5, No. 10. (1 October 2007), pp. 2113-2144.
    by Samuel Levy, Granger Sutton, Pauline C Ng, Lars Feuk, Aaron L Halpern, Brian P Walenz, Nelson Axelrod, Jiaqi Huang, Ewen F Kirkness, Gennady Denisov, Yuan Lin, Jeffrey R Macdonald, Andy W Pang, Mary Shago, Timothy B Stockwell, Alexia Tsiamouri, Vineet Bafna, Vikas Bansal, Saul A Kravitz, Dana A Busam, Karen Y Beeson, Tina C Mcintosh, Karin A Remington, Josep F Abril, John Gill, Jon Borman, Yu-Hui Rogers, Marvin E Frazier, Stephen W Scherer, Robert L Strausberg, Craig J Venter
    posted to computational-biology by maburkitt on 2008-01-16 15:00:43 as ** along with 19 people and 1 group adijr Neeperando operon carlblesius bpb balicea skhadar dullhunk djkt jackjackjjj ramensky massivemayhem jasonbobe PredictER lp2 cabbagezs xingxu hpaces nhp Bioinformatics
  • Trail geometry gives polarity to ant foraging networks
    Nature, Vol. 432, No. 7019. (16 December 2004), pp. 907-909.
    by Duncan E Jackson, Mike Holcombe, Francis L Ratnieks
    posted to computational-biology by maburkitt on 2008-01-19 11:34:08 as **
  • Toward computational systems biology
    Cell Biochemistry and Biophysics, Vol. 40, No. 2. (April 2004), pp. 167-184.
    by Lingchong You
    posted to computational-biology by maburkitt on 2008-01-18 19:04:48 as **
  • A guide to modelling cardiac electrical activity in anatomically detailed ventricles
    Progress in Biophysics and Molecular Biology, Vol. In Press, Corrected Proof (2007)
    by RH Clayton, AV Panfilov
    posted to computational-biology by maburkitt on 2008-01-15 11:59:53 as ** along with 2 people and 1 group brocktice rsimitev rs Cardiac
  • On the accuracy of statistical procedures in Microsoft Excel 97
    Computational Statistics & Data Analysis, Vol. 31, No. 1. (28 July 1999), pp. 27-37.
    by BD Mccullough, Berry Wilson
    posted to computational-biology by maburkitt on 2008-01-14 15:06:04 as **
  • Computational systems biology in drug discovery and development: methods and applications.
    Drug Discovery Today, Vol. 12, No. 7-8. (April 2007), pp. 295-303.
    by W Materi, DS Wishart
    posted to computational-biology by maburkitt on 2008-01-17 21:08:57 as ** along with 2 people jyuh csanford
  • The application of systems biology to drug discovery
    Current Opinion in Chemical Biology, Vol. 10, No. 4. (August 2006), pp. 294-302.
    by Carolyn R Cho, Mark Labow, Mischa Reinhardt, Jan Van Oostrum, Manuel C Peitsch
    posted to computational-biology by maburkitt on 2008-01-11 07:24:50 as ** along with 1 person tardigrade
  • Modeling and simulation of genetic regulatory systems: a literature review.
    Journal of Computational Bioliology, Vol. 9, No. 1. (2002), pp. 67-103.
    by H De Jong
    posted to computational-biology by maburkitt on 2008-01-15 13:04:53 as ** along with 14 people and 3 groups eldan tmmurali bayesian balicea Happybene wnpx kengg noano sstoma josepe dagmar jo_davies roys phoenixzxl VirtualPlants Plantandetc compneur
  • Attacking complex problems with the power of systems biology.
    Plant Physiology, Vol. 132, No. 2. (June 2003), pp. 417-419.
    by F Katagiri
    posted to computational-biology by maburkitt on 2008-01-17 20:54:17 as ** along with 1 person and 1 group karthikram Neoscientists
  • Integration from proteins to organs: the Physiome Project
    Nature Reviews Molecular Cell Biology, Vol. 4, No. 3. (March 2003), pp. 237-243.
    by Peter J Hunter, Thomas K Borg
    posted to computational-biology by maburkitt on 2008-01-19 17:10:35 as **
  • The epitheliome: agent-based modelling of the social behaviour of cells
    Biosystems, Vol. 76, No. 1-3. ( 2004), pp. 89-100.
    by DC Walker, J Southgate, G Hill, M Holcombe, DR Hose, SM Wood, Mac, RH Smallwood
    posted to computational-biology by maburkitt on 2008-01-19 11:19:51 as ** along with 1 person elorenz
  • An integrated agent-mathematical model of the effect of intercellular signalling via the epidermal growth factor receptor on cell proliferation.
    Journal of Theoretical Biology, Vol. 242, No. 3. (7 October 2006), pp. 774-789.
    by D Walker, S Wood, J Southgate, M Holcombe, R Smallwood
    posted to computational-biology by maburkitt on 2008-01-15 15:05:35 as ** along with 1 person mhucka
  • Systems Biology and grid technologies: Challenges for understanding complex cell signaling networks
    Future Generation Computer Systems, Vol. 23, No. 3. (March 2007), pp. 428-434.
    by Irina Strizh, Alexei Joutchkov, Nikolay Tverdokhlebov, Sergey Golitsyn
    posted to computational-biology by maburkitt on 2008-01-11 07:41:46 as **
  • What is a hidden Markov model?
    Nat Biotechnol, Vol. 22, No. 10. (October 2004), pp. 1315-1316.
    by SR Eddy
    posted to computational-biology hidden-markov-model review by indigoviolet to the group EisenLab on 2007-11-27 09:42:22 as ** along with 6 people brian aprasad timflutre berthoums mailund dullhunk
  • Computational Biology Of Cancer: Lecture Notes And Mathematical Modeling
    (01 January 2005)
    by Dominik Wodarz, Natalia L Komarova
    posted to mathematics computational-biology by ciga to the group Computational_Information_Geometry on 2007-08-30 02:58:31 as ** along with 1 person artur
  • On the optimality of the neighbor-joining algorithm
    Algorithms for Molecular Biology, Vol. 3 (30 April 2008), 5.
    by Kord Eickmeyer, Peter Huggins, Lior Pachter, Ruriko Yoshida
    posted to computational-biology methods neighbor-joining phylogenetics phylogeny-inference by cmzmasek on 2008-05-01 18:09:43 as ** along with 3 people Tingting dquest joaocarrico
  • BayGO: Bayesian analysis of ontology term enrichment in microarray data.
    BMC Bioinformatics, Vol. 7 (2006)
    by RZ Vêncio, T Koide, SL Gomes, CA Pereira
    posted to bayesian-methods computational-biology gene-ontology go-analysis go-term-enrichment methods by cmzmasek on 2008-06-12 23:52:50 as ** along with 1 person jfr
  • Use and misuse of the gene ontology annotations.
    Nature reviews. Genetics (13 May 2008)
    by Seung Yon Rhee, Valerie Wood, Kara Dolinski, Sorin Draghici
    posted to computational-biology go-analysis go-categorization go-term-enrichment methods review by cmzmasek on 2008-06-18 23:09:19 as ** along with 21 people and 2 groups jfr djkt jyuh aheilbut mariakmejia A_Olympia realzhang carlk roys gjuggler fpattyn RamuAnandakrishnan ptrobajo giovenko cabbagesofdoom tmmurali renatomilani capitall marck rvosa bpcusack logics of knowledge FAB-lab
  • The gene ontology categorizer.
    Bioinformatics, Vol. 20 Suppl 1 (4 August 2004)
    by CA Joslyn, SM Mniszewski, A Fulmer, G Heaton
    posted to computational-biology gene-ontology go-analysis go-categorization methods by cmzmasek on 2008-06-13 00:25:43 as ** along with 1 person ziquje
  • Bayesian methods in bioinformatics and computational systems biology.
    Brief Bioinform (12 April 2007)
    by Darren J J Wilkinson
    posted to bayesian-statistics bioinformatics computational-biology systems-biology by blobbybirdman on 2007-10-09 18:27:25 as *** along with 14 people and 1 group jyuh Borelli jfr wnpx neveaire zwang bertelsen cabbagezs julesyoo hpaces vietanh0 waszak i-stevenson quianominorleo Bioinformatics
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