新規登録 | ログイン | FAQ      [?] 

タグ: chip [211 articles]

Recent papers classified by the tag chip.
  • An elaborate pathway required for Ras-mediated epigenetic silencing
    Nature, Vol. 449, No. 7165., pp. 1073-1077.
    by Claude Gazin, Narendra Wajapeyee, Stephane Gobeil, Ching-Man Virbasius, Michael R Green
    posted to chip sirt6 by zhlei on 2008-06-20 15:55:22 as ** along with 2 people jackjackjjj SciNika
  • Enzyme family–specific and activity-based screening of chemical libraries using enzyme microarrays
    Nature Biotechnology, Vol. 23, No. 5. (10 April 2005), pp. 622-627.
    by Daniel P Funeriu, Jörg Eppinger, Lucile Denizot, Masato Miyake, Jun Miyake
    posted to chip drugdiscovery enzyme hts by Yanno on 2006-05-16 08:28:04 as read
  • Analysis of yeast protein kinases using protein chips.
    Nat Genet, Vol. 26, No. 3. (November 2000), pp. 283-289.
    by H Zhu, JF Klemic, S Chang, P Bertone, A Casamayor, KG Klemic, D Smith, M Gerstein, MA Reed, M Snyder
    posted to chip kinase method by Yanno on 2006-05-28 17:04:29 as read
  • Serial Analysis of Gene Expression Study of a Hybrid Rice Strain (LYP9) and Its Parental Cultivars
    Plant Physiol., Vol. 138, No. 3. (1 July 2005), pp. 1216-1231.
    by Jingyue Bao, Sanggyu Lee, Chen Chen, Xiuqing Zhang, Yu Zhang, Siqi Liu, Terry Clark, Jian Wang, Mengliang Cao, Huanming Yang, San M Wang, Jun Yu
    posted to chip heterosis rice by xwbcn on 2006-03-26 08:14:18 as ***
  • NCBI GEO: mining millions of expression profiles--database and tools.
    Nucleic Acids Res, Vol. 33, No. Database issue. (1 January 2005)
    by T Barrett, TO Suzek, DB Troup, SE Wilhite, WC Ngau, P Ledoux, D Rudnev, AE Lash, W Fujibuchi, R Edgar
    posted to chip by xwbcn on 2005-12-26 09:13:38 as ** along with 3 people balajis gpalidwor frohike
  • From the Cover: Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
    PNAS, Vol. 102, No. 43. (25 October 2005), pp. 15545-15550.
    by Aravind Subramanian, Pablo Tamayo, Vamsi K Mootha, Sayan Mukherjee, Benjamin L Ebert, Michael A Gillette, Amanda Paulovich, Scott L Pomeroy, Todd R Golub, Eric S Lander, Jill P Mesirov
    posted to chip data_mining human microarray pathway by xwbcn on 2006-08-16 10:28:45 as *** along with 22 people and 4 groups dragonrez jfr balajis maryee hpiwowar aviad_work ealloza jdiggans jeremymiller frohike hawkeyehammer schuylrp natstreet heliopais shikin waghsk roys ellakat srp33 ihpark sgoetz AbnerCYH Bioinformatics BioinfoCIPF GeschwindLab Indigene
  • A gene expression map of Arabidopsis thaliana development
    Nature Genetics, Vol. 37, No. 5. (03 April 2005), pp. 501-506.
    by Markus Schmid, Timothy S Davison, Stefan R Henz, Utz J Pape, Monika Demar, Martin Vingron, Bernhard Schölkopf, Detlef Weigel, Jan U Lohmann
    posted to arabidopsis chip comparative_study microarray by xwbcn on 2006-07-06 16:16:47 as ***** along with 3 people and 1 group scuffster natstreet p2vani Botany and Plant Sciences
  • Establishing glucose- and ABA-regulated transcription networks in Arabidopsis by microarray analysis and promoter classification using a Relevance Vector Machine.
    Genome Res (19 January 2006)
    by Yunhai Li, Kee Khoon K Lee, Sean Walsh, Caroline Smith, Sophie Hadingham, Karim Sorefan, Gavin Cawley, Michael W W Bevan
    posted to arabidopsis chip motif by xwbcn on 2006-04-04 14:20:09 as **
  • Qualitative network models and genome-wide expression data define carbon/nitrogen-responsive molecular machines in Arabidopsis
    Genome Biology, Vol. 8 (11 January 2007), R7.
    by Rodrigo A Gutierrez, Laurence Lejay, Alexis Dean, Francesca Chiaromonte, Dennis E Shasha, Gloria M Coruzzi
    posted to arabidopsis chip comparative_study expression gene_ontology genome microarray networks transcriptome by xwbcn on 2007-03-24 08:24:08 as ** along with 1 person natstreet
  • Preferred analysis methods for Affymetrix GeneChips revealed by a wholly defined control dataset.
    Genome Biol, Vol. 6, No. 2. (2005)
    by SE Choe, M Boutros, AM Michelson, GM Church, MS Halfon
    posted to chip comparative_study method microarray by xwbcn on 2007-02-26 15:21:39 as ** along with 5 people and 1 group jeremymiller ccr ghattem waszak daforerog GeschwindLab
  • Comparative analysis of the Arabidopsis pollen transcriptome.
    Plant Physiol, Vol. 132, No. 2. (June 2003), pp. 640-652.
    by D Honys, D Twell
    posted to arabidopsis chip comparative_study microarray by xwbcn on 2006-06-16 15:01:35 as ***
  • Genome-wide analysis of spatial and temporal gene expression in rice panicle development
    The Plant Journal, Vol. 46, No. 3. (May 2006), pp. 503-511.
    by Ikuyo Furutani, Shin Sukegawa, Junko Kyozuka
    posted to chip expression flowering microarray rice by xwbcn on 2006-05-30 18:56:54 as ***
  • Consensus by democracy. Using meta-analyses of microarray and genomic data to model the cold acclimation signaling pathway in Arabidopsis.
    Plant Physiol, Vol. 141, No. 4. (August 2006), pp. 1219-1232.
    by C Benedict, M Geisler, J Trygg, N Huner, V Hurry
    posted to arabidopsis chip cold comparative_study data_mining expression genome microarray motif networks transcriptome by xwbcn on 2007-06-11 15:16:05 as ** along with 1 person natstreet
  • Single feature polymorphism discovery in rice.
    PLoS ONE, Vol. 2 (2007)
    by R Kumar, J Qiu, T Joshi, B Valliyodan, D Xu, HT Nguyen
    posted to chip genome plant plants rice sfp by xwbcn on 2007-03-22 06:48:35 as ***** along with 1 person natstreet
  • Large-scale Cis-element Detection by Analysis of Correlated Expression and Sequence Conservation between Arabidopsis and Brassica oleracea.
    Plant Physiol (6 October 2006)
    by Georg Haberer, Michael T T Mader, Peter Kosarev, Manuel Spannagl, Li Yang, Klaus Fx F Mayer
    posted to arabidopsis chip comparative_study genome microarray motif promoter by xwbcn on 2006-10-13 02:53:11 as ** along with 4 people and 1 group dpollard kengg nklee xili03 EisenLab
  • Genome-wide prediction of transcriptional regulatory elements of human promoters using gene expression and promoter analysis data
    BMC Bioinformatics, Vol. 7 (04 July 2006), 330.
    by Seon-Young Kim, Yongsung Kim
    posted to tf promoter microarray mammal human_genome genome expression chip by xwbcn on 2007-01-13 04:28:37 as ** along with 2 people jfr Ao_Li2007
  • High-density haplotyping with microarray-based expression and single feature polymorphism markers in Arabidopsis.
    Genome Res, Vol. 16, No. 6. (June 2006), pp. 787-795.
    by MA West, H van Leeuwen, A Kozik, DJ Kliebenstein, RW Doerge, DA St Clair, RW Michelmore
    posted to arabidopsis chip microarray sfp by xwbcn on 2006-06-14 07:54:19 as ***** along with 1 person RMGraze
  • A genome-wide transcriptional analysis using Arabidopsis thaliana Affymetrix gene chips determined plant responses to phosphate deprivation
    PNAS, Vol. 102, No. 33. (16 August 2005), pp. 11934-11939.
    by Julie Misson, Kashchandra G Raghothama, Ajay Jain, Juliette Jouhet, Maryse A Block, Richard Bligny, Philippe Ortet, Audrey Creff, Shauna Somerville, Norbert Rolland, Patrick Doumas, Philippe Nacry, Luis Herrerra-Estrella, Laurent Nussaume, Marie-Christine Thibaud
    posted to arabidopsis chip by xwbcn on 2006-03-25 16:16:58 as **** along with 1 person byy
  • Gametophytic selection in Arabidopsis thaliana supports the selective model of intron length reduction.
    PLoS Genet, Vol. 1, No. 2. (August 2005)
    by C Seoighe, C Gehring, LD Hurst
    posted to arabidopsis chip expression flowering intron microarray pollen by xwbcn on 2006-08-01 13:47:09 as *** along with 1 person bpcusack
  • Transcriptional profiling of genes responsive to abscisic acid and gibberellin in rice: phenotyping and comparative analysis between rice and Arabidopsis.
    Physiol Genomics, Vol. 17, No. 2. (13 April 2004), pp. 87-100.
    by J Yazaki, Z Shimatani, A Hashimoto, Y Nagata, F Fujii, K Kojima, K Suzuki, T Taya, M Tonouchi, C Nelson, A Nakagawa, Y Otomo, K Murakami, K Matsubara, J Kawai, P Carninci, Y Hayashizaki, S Kikuchi
    posted to arabidopsis chip genome microarray motif rice by xwbcn on 2006-03-07 09:50:02 as *****
  • Gene family analysis of the Arabidopsis pollen transcriptome reveals biological implications for cell growth, division control, and gene expression regulation.
    Plant Physiol, Vol. 138, No. 2. (June 2005), pp. 744-756.
    by C Pina, F Pinto, JA Feijó, JD Becker
    posted to arabidopsis chip comparative_study microarray pollen by xwbcn on 2006-06-16 16:03:36 as ***
  • A microarray analysis of the rice transcriptome and its comparison to Arabidopsis.
    Genome Res, Vol. 15, No. 9. (September 2005), pp. 1274-1283.
    by L Ma, C Chen, X Liu, Y Jiao, N Su, L Li, X Wang, M Cao, N Sun, X Zhang, J Bao, J Li, S Pedersen, L Bolund, H Zhao, L Yuan, GK Wong, J Wang, XW Deng, J Wang
    posted to arabidopsis chip genome rice by xwbcn on 2006-01-14 07:15:17 as **
  • Empirical Analysis of Transcriptional Activity in the Arabidopsis Genome
    Science, Vol. 302, No. 5646. (31 October 2003), pp. 842-846.
    by Kayoko Yamada, Jun Lim, Joseph M Dale, Huaming Chen, Paul Shinn, Curtis J Palm, Audrey M Southwick, Hank C Wu, Christopher Kim, Michelle Nguyen, Paul Pham, Rosa Cheuk, George Karlin-Newmann, Shirley X Liu, Bao Lam, Hitomi Sakano, Troy Wu, Guixia Yu, Molly Miranda, Hong L Quach, Matthew Tripp, Charlie H Chang, Jeong M Lee, Mitsue Toriumi, Marie M Chan, Carolyn C Tang, Courtney S Onodera, Justine M Deng, Kenji Akiyama, Yasser Ansari, Takahiro Arakawa, Jenny Banh, Fumika Banno, Leah Bowser, Shelise Brooks, Piero Carninci, Qimin Chao, Nathan Choy, Akiko Enju, Andrew D Goldsmith, Mani Gurjal, Nancy F Hansen, Yoshihide Hayashizaki, Chanda Johnson-Hopson, Vickie W Hsuan, Kei Iida, Meagan Karnes, Shehnaz Khan, Eric Koesema, Junko Ishida, Paul X Jiang, Ted Jones, Jun Kawai, Asako Kamiya, Cristina Meyers, Maiko Nakajima, Mari Narusaka, Motoaki Seki, Tetsuya Sakurai, Masakazu Satou, Racquel Tamse, Maria Vaysberg, Erika K Wallender, Cecilia Wong, Yuki Yamamura, Shiaulou Yuan, Kazuo Shinozaki, Ronald W Davis, Athanasios Theologis, Joseph R Ecker
    posted to arabidopsis chip comparative_study microarray by xwbcn on 2006-05-18 03:00:13 as ***** along with 2 people and 1 group sdinka kaspermunch Bioinformatics
  • High-throughput Biochemical Analysis of in-vivo Location Data Reveals Novel Classes of POU5F1(Oct4)/DNA complexes.
    Genome Res (22 January 2008)
    by Dean Tantin, Matt Gemberling, Catherine Callister, Will Fairbrother
    posted to chip methods pou5f1 tf by xingxu on 2008-05-19 20:20:46 as ** along with 2 people maximilianh caseybrown
  • ChIP-chip Comes of Age for Genome-wide Functional Analysis
    Cancer Res, Vol. 66, No. 14. (15 July 2006), pp. 6899-6902.
    by Jiejun Wu, Laura T Smith, Christoph Plass, Tim H Huang
    posted to chip by weimingzhe on 2006-08-18 14:40:28 as ** along with 3 people and 1 group jyuh imedina tvdbulck BioinfoCIPF
  • Genome-Wide Analysis of Protein-DNA Interactions.
    Annu Rev Genomics Hum Genet, Vol. 7 (2006), pp. 81-102.
    by TH Kim, B Ren
    posted to chip by waraz on 2008-04-09 04:07:20 as ** along with 2 people sebastien_vigneau epigenetics
  • Genome-wide approaches to studying chromatin modifications
    Nat Rev Genet, Vol. 9, No. 3. (March 2008), pp. 179-191.
    by Dustin E Schones, Keji Zhao
    posted to chip chromatin review survey by vega on 2008-04-07 08:15:29 as ** along with 8 people tmmurali dchughes zwang cabbagezs idonaldson faion bpcusack jyuh
  • A Chromatin Immunoprecipitation Screen Reveals Protein Kinase Cbeta as a Direct RUNX1 Target Gene
    J. Biol. Chem., Vol. 279, No. 2. (9 January 2004), pp. 825-830.
    by Bruce A Hug, Nazia Ahmed, Jonathan A Robbins, Mitchell A Lazar
    posted to chip by vega on 2008-01-08 03:01:28 as **
  • Mapping DNA-protein interactions in large genomes by sequence tag analysis of genomic enrichment
    Nature Methods, Vol. 2, No. 1. (21 December 2004), 47.
    by Jonghwan Kim, Akshay A Bhinge, Xochitl C Morgan, Vishwanath R Iyer
    posted to chip by vega on 2008-01-08 03:08:17 as **
  • Chromatin immunoprecipitation: optimization, quantitative analysis and data normalization
    Plant Methods, Vol. 3 (24 September 2007), 11.
    by Max Haring, Sascha Offermann, Tanja Danker, Ina Horst, Christoph Peterhaensel, Maike Stam
    posted to chip sonication by vega on 2008-04-24 10:24:33 as read along with 2 people jyuh kengg
  • An integrated resource for genome-wide identification and analysis of human tissue-specific differentially methylated regions (tDMRs)
    Genome Res. (24 June 2008), gr.077479.108.
    by Vardhman Rakyan, Thomas Down, Natalie Thorne, Paul Flicek, Eugene Kulesha, Stefan Graf, Eleni Tomazou, Liselotte Backdahl, Nathan Johnson, Marils Herberth, Kevin Howe, David Jackson, Marcos Miretti, Heike Fiegler, John Marioni, Ewan Birney, Tim Hubbard, Nigel Carter, Simon Tavare, Stephan Beck
    posted to bioinformatics chip chromatin histone methylation by vega on 2008-06-30 15:15:46 as ** along with 2 people rschulz niallhaslam
  • FindPeaks 3.1: a tool for identifying areas of enrichment from massively parallel short-read sequencing technology
    Bioinformatics, Vol. 24, No. 15. (1 August 2008), pp. 1729-1730.
    by Anthony P Fejes, Gordon Robertson, Mikhail Bilenky, Richard Varhol, Matthew Bainbridge, Steven J Jones
    posted to bioinformatics chip sequencing by vega on 2008-08-08 06:15:24 as ** along with 3 people sconlan reyez jyuh
  • Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing.
    Nat Methods (11 June 2007)
    by Gordon Robertson, Martin Hirst, Matthew Bainbridge, Misha Bilenky, Yongjun Zhao, Thomas Zeng, Ghia Euskirchen, Bridget Bernier, Richard Varhol, Allen Delaney, Nina Thiessen, Obi L L Griffith, Ann He, Marco Marra, Michael Snyder, Steven Jones
    posted to bioinformatics chip tfbs by vega on 2008-02-07 03:01:09 as read along with 6 people and 1 group jyuh kengg ghattem slevy03 dquest raiyar Plantandetc
  • Protocol for the fast chromatin immunoprecipitation (ChIP) method.
    Nat Protoc, Vol. 1, No. 1. (2006), pp. 179-185.
    by JD Nelson, O Denisenko, K Bomsztyk
    posted to chip chromatin protocol by uz_labu_laimi on 2007-04-26 14:57:19 as *** along with 3 people johncumbers sebastien_vigneau kristallreiner
  • Microenvironment design considerations for cellular scale studies.
    Lab Chip, Vol. 4, No. 2. (April 2004), pp. 91-97.
    by GM Walker, HC Zeringue, DJ Beebe
    posted to cell chip design flow microfluidic pdms by tsjipko on 2007-08-15 15:02:36 as ****
  • Endothelialized Networks with a Vascular Geometry in Microfabricated Poly(dimethyl siloxane)
    Biomedical Microdevices, Vol. 6, No. 4., 269.
    by Michael Shin, Kant Matsuda, Osamu Ishii, Hidetomi Terai, Mohammed Kaazempur-Mofrad, Jeffrey Borenstein, Michael Detmar, Joseph P Vacanti
    posted to chip endothelial flow hmec-1 pdms by tsjipko on 2006-12-06 10:28:44 as ***
  • Microfluidic shear devices for quantitative analysis of cell adhesion.
    Anal Chem, Vol. 76, No. 18. (15 September 2004), pp. 5257-5264.
    by H Lu, LY Koo, WM Wang, DA Lauffenburger, LG Griffith, KF Jensen
    posted to adhesion cell chip microfluidic pdms shear by tsjipko on 2006-08-30 15:54:42 as ***
  • Pathways to the analysis of microarray data
    Trends in Biotechnology, Vol. 23, No. 8. (August 2005), pp. 429-435.
    by Keira R Curtis, Matej Oresic, Antonio Vidal-Puig
    posted to chip puces_adn reseaux by textoris on 2005-08-21 16:58:43 as **** along with 5 people and 1 group snuppepuppan Ayest tardigrade ealloza heliopais BioinfoCIPF
  • Traitement chirurgical a visee curatrice des carcinoses peritoneales
    EMC - Chirurgie, Vol. 1, No. 1. (February 2004), pp. 67-78.
    by D Elias, L Sideris, O Baton, P Lasser, M Pocard
    posted to carcinose chip chirurgie emc by textoris on 2005-06-27 18:10:04 as **
  • Microchip traps and BoseâEinstein condensation
    Applied Physics B: Lasers and Optics, Vol. V74, No. 6. (1 April 2002), pp. 469-487.
    by J Reichel
    posted to chip by tapnews on 2007-03-01 11:20:47 as ** along with 3 people and 1 group spreeuw lundblad swhitlock Qugatopia
  • Microwave potentials and optimal control for robust quantum gates on an atom chip
    (9 Jun 2006)
    by Philipp Treutlein, Theodor W Hänsch, Jakob Reichel, Antonio Negretti, Markus A Cirone, Tommaso Calarco
    posted to trap phase microwave gate chip by tapnews on 2007-01-28 10:48:22 as ** along with 1 person hweel20060612
  • Bose-Einstein condensation on a permanent-magnet atom chip
    Physical Review A (Atomic, Molecular, and Optical Physics), Vol. 72, No. 3. (2005)
    by CDJ Sinclair, EA Curtis, Llorente I Garcia, JA Retter, BV Hall, S Eriksson, BE Sauer, EA Hinds
    posted to bec chip by tapnews on 2007-03-01 11:28:50 as ** along with 1 person and 1 group spreeuw Qugatopia
  • Modeling ChIP Sequencing In Silico with Applications
    PLoS Comput Biol, Vol. 4, No. 8. (2008), e1000158.
    by Zhengdong D Zhang, Joel Rozowsky, Michael Snyder, Joseph Chang, Mark Gerstein
    posted to chip in-silico model sequencing by Stew on 2008-08-24 20:49:38 as ** along with 5 people aramesh2 djkt kengg gdb caseybrown
  • Fast-evolving non-coding sequences in the human genome
    Genome Biology, Vol. 8 (19 June 2007), R118.
    by Christine P Bird, Barbara E Stranger, Maureen Liu, Daryl J Thomas, Catherine E Ingle, Claude Beazley, Webb Miller, Matthew E Hurles, Emmanouil T Dermitzakis
    posted to chip conserved dermitzakis evolution human non-coding positive selection by Stew on 2007-07-27 23:07:05 as read along with 5 people and 2 groups djkt jlangdon cisevol iris42 bpcusack EisenLab cis-regulatory-evolution
  • Mapping histone modifications by nucleosome immunoprecipitation.
    Methods Enzymol, Vol. 410 (2006), pp. 416-430.
    by DJ Clark, CH Shen
    posted to chip chromatin immunoprecipitation minichromosome review by skoch3 on 2007-12-16 07:11:51 as *****
  • Mapping proteinDNA interactions in vivo with formaldehyde: Evidence that histone H4 is retained on a highly transcribed gene
    Cell, Vol. 53, No. 6. (17 June 1988), pp. 937-947.
    by Mark J Solomon, Pamela L Larsen, Alexander Varshavsky
    posted to chip chromatin by skoch3 on 2008-01-30 20:10:59 as ****
  • Roles of ATM and NBS1 in chromatin structure modulation and DNA double-strand break repair
    Nature Cell Biology, Vol. 9, No. 6. (07 May 2007), pp. 683-690.
    by Elijahu Berkovich, Raymond J Monnat, Michael B Kastan
    posted to atm break chip double-strand dsb human i-ppoi nbs1 repair by skoch3 on 2008-04-13 07:16:19 as read
  • Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome.
    Nat Genet (4 February 2007)
    by Nathaniel D D Heintzman, Rhona K K Stuart, Gary Hon, Yutao Fu, Christina W W Ching, R David D Hawkins, Leah O O Barrera, Sara Van Calcar, Chunxu Qu, Keith A A Ching, Wei Wang, Zhiping Weng, Roland D D Green, Gregory E E Crawford, Bing Ren
    posted to chip chromatin enhancers promoters transcription by skoch3 on 2008-01-02 23:01:09 as **** along with 7 people and 2 groups kengg djkt mgaldzic olympos epigenetics caseybrown inesdesantiago CHIP Plantandetc
  • Chop it, ChIP it, check it: the current status of chromatin immunoprecipitation.
    Front Biosci, Vol. 13 (2008), pp. 929-943.
    by P Collas, JA Dahl
    posted to chip chromatin immunoprecipitation review by skoch3 on 2007-12-16 07:04:19 as ***** along with 1 group Koch_Lab
  • Chromatin immunoprecipitation assay.
    Biotechniques, Vol. 37, No. 6. (December 2004), pp. 961-969.
    by PM Das, K Ramachandran, J vanWert, R Singal
    posted to chip chromatin methods by sennoma on 2005-07-28 21:39:39 as **
    • 注: このページを引用する時は次のURLでどうぞ: http://www.citeulike.org/tag/chip

    Result page: 1 2 3 4 5 Next RIS BibTeX
    CiteULike organises scholarly (or academic) papers or literature and provides bibliographic (which means it makes bibliographies) for universities and higher education establishments. It helps undergraduates and postgraduates. People studying for PhDs or in postdoctoral (postdoc) positions. The service is similar in scope to EndNote or RefWorks or any other reference manager like BibTeX, but it is a social bookmarking service for scientists and humanities researchers.