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adaptation aire alkane alks alphaproteobacteria anaerobic anr apeced arac assesment bacteria benm benzoate binding biodegradation biosensors biosynthesis biotechnology bzdr carbazole catm catr cell-cycle chemical-distance classification coli corynebacterium crc cross-regulation dmpr dna-bending dynamics eco-engineering ethylbenzene eukariot eukatior evolution family flagella flagellar for-the-review functional-residues fungi genome genome-wide genomics gentisate historic hmgr homogentisate iclr inducer inducers in-situ integration interaction logic lysr marr marra metabolic metabolism methods model modelling motility m-xylene network new-enzyme new-family ntrc origin orthologs o-xylene pathogenesis pathway pathways pcau phtalate po post-transcriptional ppgpp prediction profile promoter protein proteomics pseudomonas quinoline ragulation readtrough reconstruction regulation review rhodococcus score screening sigma sigma54 signals simulation site soxrs statistics stress structure styrene synergystic synthetic-biology systems-biology tanimoto tcrst tcst tol toluene tour transcription transcriptional-noise transcriptomic transcriptomics translation vanillate virulence xylr xyls yeast

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