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Group: Bioinformatics - with tag 1001 [27 articles]

グループ Bioinformatics のメンバーが最近追加した論文の一覧 with tag 1001
  • Computational analysis of full-length mouse cDNAs compared with human genome sequences
    Mamm Genome, Vol. 12, No. 9. (Sep 2001), pp. 673-677.
  • Gene structure prediction and alternative splicing analysis using genomically aligned ESTs
    Genome Res, Vol. 11, No. 5. (May 2001), pp. 889-900.
    by Z Kan, EC Rouchka, WR Gish, DJ States
  • In silico screening for tumour-specific expressed sequences in human genome
    FEBS Lett, Vol. 508, No. 1. (Nov 2001), pp. 143-148.
  • Alternative splicing and genome complexity
    Nat Genet, Vol. 30, No. 1. (Jan 2002), pp. 29-30.
    by D Brett, H Pospisil, J Valcarcel, J Reich, P Bork
  • Experimental annotation of the human genome using microarray technology
    Nature, Vol. 409, No. 6822. (Feb 2001), pp. 922-927.
    by DD Shoemaker, EE Schadt, CD Armour, YD He, Garrett P Engele, PD Mcdonagh, PM Loerch, A Leonardson, PY Lum, G Cavet, LF Wu, SJ Altschuler, S Edwards, J King, JS Tsang, G Schimmack, JM Schelter, J Koch, M Ziman, MJ Marton, B Li, P Cundiff, T Ward, J Castle, M Krolewski, MR Meyer, M Mao, J Burchard, MJ Kidd, H Dai, JW Phillips, PS Linsley, R Stoughton, S Scherer, MS Boguski
  • Inferring alternative splicing patterns in mouse from a full-length cDNA library and microarray data
    Genome Res, Vol. 12, No. 8. (Aug 2002), pp. 1286-1293.
  • The human genome browser at UCSC
    Genome Res, Vol. 12, No. 6. (Jun 2002), pp. 996-1006.
    by WJ Kent, CW Sugnet, TS Furey, KM Roskin, TH Pringle, AM Zahler, D Haussler
  • RefSeq and LocusLink: NCBI gene-centered resources
    Nucleic Acids Res, Vol. 29, No. 1. (Jan 2001), pp. 137-140.
    by KD Pruitt, DR Maglott
  • Predictive identification of exonic splicing enhancers in human genes
    Science, Vol. 297, No. 5583. (Aug 2002), pp. 1007-1013.
    by WG Fairbrother, RF Yeh, PA Sharp, CB Burge
  • Functions and mechanisms of RNA editing
    Annu Rev Genet, Vol. 34 (2000), pp. 499-531.
    by JM Gott, RB Emeson
  • Integrating genomic homology into gene structure prediction
    Bioinformatics, Vol. 17 Suppl 1 (2001), pp. S140-S148.
    by I Korf, P Flicek, D Duan, MR Brent
  • An assessment of gene prediction accuracy in large DNA sequences
    Genome Res, Vol. 10, No. 10. (Oct 2000), pp. 1631-1642.
    by R Guigo, P Agarwal, JF Abril, M Burset, JW Fickett
  • Genome-wide detection of alternative splicing in expressed sequences of human genes
    Nucleic Acids Res, Vol. 29, No. 13. (Jul 2001), pp. 2850-2859.
    by B Modrek, A Resch, C Grasso, C Lee
  • A genomic view of alternative splicing
    Nat Genet, Vol. 30, No. 1. (Jan 2002), pp. 13-19.
    by B Modrek, C Lee
  • Analysis of canonical and non-canonical splice sites in mammalian genomes
    Nucleic Acids Res, Vol. 28, No. 21. (Nov 2000), pp. 4364-4375.
  • BLAT--the BLAST-like alignment tool
    Genome Res, Vol. 12, No. 4. (Apr 2002), pp. 656-664.
    by WJ Kent
  • Computational identification of promoters and first exons in the human genome
    Nat Genet, Vol. 29, No. 4. (Dec 2001), pp. 412-417.
    by RV Davuluri, I Grosse, MQ Zhang
  • Evaluation of gene-finding programs on mammalian sequences
    Genome Res, Vol. 11, No. 5. (May 2001), pp. 817-832.
  • GeneMarkS: a self-training method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions
    Nucleic Acids Res, Vol. 29, No. 12. (Jun 2001), pp. 2607-2618.
  • Analysis of similarity within 142 pairs of orthologous intergenic regions of Caenorhabditis elegans and Caenorhabditis briggsae
    Nucleic Acids Res, Vol. 30, No. 5. (Mar 2002), pp. 1233-1239.
    by CT Webb, SA Shabalina, AY Ogurtsov, AS Kondrashov
  • Human GC-AG alternative intron isoforms with weak donor sites show enhanced consensus at acceptor exon positions
    Nucleic Acids Res, Vol. 29, No. 12. (Jun 2001), pp. 2581-2593.
    by TA Thanaraj, F Clark
  • Analysis of the role of Caenorhabditis elegans GC-AG introns in regulated splicing
    Nucleic Acids Res, Vol. 30, No. 15. (Aug 2002), pp. 3360-3367.
    by T Farrer, AB Roller, WJ Kent, AM Zahler
  • A systematic approach to dynamic programming in bioinformatics
    Bioinformatics, Vol. 16, No. 8. (Aug 2000), pp. 665-677.
  • Digging for dead genes: an analysis of the characteristics of the pseudogene population in the Caenorhabditis elegans genome
    Nucleic Acids Res, Vol. 29, No. 3. (Feb 2001), pp. 818-830.
    by PM Harrison, N Echols, MB Gerstein
  • Large-scale transcriptional activity in chromosomes 21 and 22
    Science, Vol. 296, No. 5569. (May 2002), pp. 916-919.
  • Non-coding RNAs: the architects of eukaryotic complexity
    EMBO Rep, Vol. 2, No. 11. (Nov 2001), pp. 986-991.
    by JS Mattick
  • Initial sequencing and analysis of the human genome
    Nature, Vol. 409, No. 6822. (Feb 2001), pp. 860-921.
    by ES Lander, LM Linton, B Birren, C Nusbaum, MC Zody, J Baldwin, K Devon, K Dewar, M Doyle, W Fitzhugh, R Funke, D Gage, K Harris, A Heaford, J Howland, L Kann, J Lehoczky, R Levine, P Mcewan, K Mckernan, J Meldrim, JP Mesirov, C Miranda, W Morris, J Naylor, C Raymond, M Rosetti, R Santos, A Sheridan, C Sougnez, Stange N Thomann, N Stojanovic, A Subramanian, D Wyman, J Rogers, J Sulston, R Ainscough, S Beck, D Bentley, J Burton, C Clee, N Carter, A Coulson, R Deadman, P Deloukas, A Dunham, I Dunham, R Durbin, L French, D Grafham, S Gregory, T Hubbard, S Humphray, A Hunt, M Jones, C Lloyd, A Mcmurray, L Matthews, S Mercer, S Milne, JC Mullikin, A Mungall, R Plumb, M Ross, R Shownkeen, S Sims, RH Waterston, RK Wilson, LW Hillier, JD Mcpherson, MA Marra, ER Mardis, LA Fulton, AT Chinwalla, KH Pepin, WR Gish, SL Chissoe, MC Wendl, KD Delehaunty, TL Miner, A Delehaunty, JB Kramer, LL Cook, RS Fulton, DL Johnson, PJ Minx, SW Clifton, T Hawkins, E Branscomb, P Predki, P Richardson, S Wenning, T Slezak, N Doggett, JF Cheng, A Olsen, S Lucas, C Elkin, E Uberbacher, M Frazier, RA Gibbs, DM Muzny, SE Scherer, JB Bouck, EJ Sodergren, KC Worley, CM Rives, JH Gorrell, ML Metzker, SL Naylor, RS Kucherlapati, DL Nelson, GM Weinstock, Y Sakaki, A Fujiyama, M Hattori, T Yada, A Toyoda, T Itoh, C Kawagoe, H Watanabe, Y Totoki, T Taylor, J Weissenbach, R Heilig, W Saurin, F Artiguenave, P Brottier, T Bruls, E Pelletier, C Robert, P Wincker, DR Smith, Doucette L Stamm, M Rubenfield, K Weinstock, HM Lee, J Dubois, A Rosenthal, M Platzer, G Nyakatura, S Taudien, A Rump, H Yang, J Yu, J Wang, G Huang, J Gu, L Hood, L Rowen, A Madan, S Qin, RW Davis, NA Federspiel, AP Abola, MJ Proctor, RM Myers, J Schmutz, M Dickson, J Grimwood, DR Cox, MV Olson, R Kaul, C Raymond, N Shimizu, K Kawasaki, S Minoshima, GA Evans, M Athanasiou, R Schultz, BA Roe, F Chen, H Pan, J Ramser, H Lehrach, R Reinhardt, WR Mccombie, de La, N Dedhia, H Blocker, K Hornischer, G Nordsiek, R Agarwala, L Aravind, JA Bailey, A Bateman, S Batzoglou, E Birney, P Bork, DG Brown, CB Burge, L Cerutti, HC Chen, D Church, M Clamp, RR Copley, T Doerks, SR Eddy, EE Eichler, TS Furey, J Galagan, JG Gilbert, C Harmon, Y Hayashizaki, D Haussler, H Hermjakob, K Hokamp, W Jang, LS Johnson, TA Jones, S Kasif, A Kaspryzk, S Kennedy, WJ Kent, P Kitts, EV Koonin, I Korf, D Kulp, D Lancet, TM Lowe, A Mclysaght, T Mikkelsen, JV Moran, N Mulder, VJ Pollara, CP Ponting, G Schuler, J Schultz, G Slater, AF Smit, E Stupka, J Szustakowski, Thierry D Mieg, Thierry J Mieg, L Wagner, J Wallis, R Wheeler, A Williams, YI Wolf, KH Wolfe, SP Yang, RF Yeh, F Collins, MS Guyer, J Peterson, A Felsenfeld, KA Wetterstrand, A Patrinos, MJ Morgan, J Szustakowki, P de Jong, JJ Catanese, K Osoegawa, H Shizuya, S Choi, YJ Chen
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