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Group: EisenLab - with tag noncoding [15 articles]

グループ EisenLab のメンバーが最近追加した論文の一覧 with tag noncoding
  • Distinguishing protein-coding and noncoding genes in the human genome
    Proceedings of the National Academy of Sciences (26 November 2007), 0709013104.
    by Michele Clamp, Ben Fry, Mike Kamal, Xiaohui Xie, James Cuff, Michael F Lin, Manolis Kellis, Kerstin Lindblad-Toh, Eric S Lander
    posted to annotation comparative_genomics gene_finding genome_annotation human noncoding orf by stajich to the group EisenLab on 2007-12-09 07:19:20 as ** along with 15 people and 2 groups Ema tmmurali rvosa balicea sebastien_vigneau giovanni neils cjeans cabbagezs maximilianh oelemento gjuggler slroberd renatomilani gracio FAB-lab Berkeley Mycology
  • Non-coding sequence retrieval system for comparative genomic analysis of gene regulatory elements
    BMC Bioinformatics, Vol. 8 (15 March 2007), 94.
    by Sung T Doh, Yunyu Zhang, Matthew H Temple, Li Cai
    posted to algorithm homology noncoding by indigoviolet to the group EisenLab on 2007-11-29 02:50:27 as ** along with 1 person jyuh
  • The regulatory content of intergenic DNA shapes genome architecture.
    Genome Biol, Vol. 5, No. 4. (2004)
    by CE Nelson, BM Hersh, SB Carroll
    posted to drosophila gene_expression genome_architecture nematode noncoding by dpollard to the group EisenLab on 2007-11-14 21:21:28 as read along with 4 people and 2 groups madhadron elzodw blobbybirdman cisevol cis-regulatory-evolution BergmanLab
  • Rapid sequence turnover at an intergenic locus in Drosophila.
    Mol Biol Evol, Vol. 21, No. 4. (April 2004), pp. 670-680.
    by ND Singh, DA Petrov
    posted to drosophila genome_architecture genome_size indels noncoding by dpollard to the group EisenLab on 2007-11-14 21:13:48 as read
  • Adaptations to fluctuating selection in Drosophila.
    Proc Natl Acad Sci U S A (7 February 2007)
    by Ville Mustonen, Michael Lässig
    posted to noncoding evolution drosophila adaptation by dpollard to the group EisenLab on 2007-02-10 01:21:39 as *** along with 1 person lusk
  • LAGAN and Multi-LAGAN: efficient tools for large-scale multiple alignment of genomic DNA.
    Genome Res, Vol. 13, No. 4. (April 2003), pp. 721-731.
    by M Brudno, CB Do, GM Cooper, MF Kim, E Davydov, ED Green, A Sidow, S Batzoglou,
    posted to alignment noncoding by dpollard to the group EisenLab on 2006-11-07 01:53:28 as read along with 13 people kcrawlik Neeperando operon balajis xwbcn dquest adepace hdopazo lusk Garamonfok adijr natstreet nklee
  • Position specific variation in the rate of evolution in transcription factor binding sites.
    BMC Evol Biol, Vol. 3, No. 1. (28 August 2003)
    by AM Moses, DY Chiang, M Kellis, ES Lander, MB Eisen
    posted to binding conserved constraint evolution noncoding pattern phylogeny prediction pwm rate selection specific transcription by dpollard to the group EisenLab on 2006-11-07 00:22:07 as read along with 6 people and 1 group emptyhb briann adepace lusk nklee cisevol cis-regulatory-evolution
  • Cis-regulatory variations: A study of SNPs around genes showing cis-linkage in segregating mouse populations
    BMC Genomics, Vol. 7 (15 September 2006), 235.
    by Debraj Guhathakurta, Tao Xie, Manish Anand, Stephen W Edwards, Guoya Li, Susana Wang, Eric E Schadt
    posted to cis gene linkage mouse noncoding polymorphism regulation variation by dpollard to the group EisenLab on 2006-09-30 00:25:03 as *** along with 2 people adepace natstreet
  • Conserved distances between vertebrate highly conserved elements.
    Hum Mol Genet (21 August 2006)
    by Hong Sun, Geir Skogerbø, Runsheng Chen
    posted to conserved noncoding spacing by dpollard to the group EisenLab on 2006-08-25 18:22:00 as ** along with 1 person aprasad
  • Scale-invariant structure of strongly conserved sequence in genomic intersections and alignments.
    Proc Natl Acad Sci U S A (21 August 2006)
    by William Salerno, Paul Havlak, Jonathan Miller
    posted to conserved constraint evolution length noncoding by dpollard to the group EisenLab on 2006-08-25 17:47:37 as ** along with 1 person jmeppley
  • Sigma: multiple alignment of weakly-conserved non-coding DNA sequence.
    BMC Bioinformatics, Vol. 7, No. 1. (16 March 2006)
    by Rahul Siddharthan
    posted to alignment noncoding by dpollard to the group EisenLab on 2006-04-02 23:08:10 as ** along with 1 person lilou
  • Genes involved in complex adaptive processes tend to have highly conserved upstream regions in mammalian genomes.
    BMC Genomics, Vol. 6 (27 November 2005)
    by S Lee, I Kohane, S Kasif
    posted to conserved development expression gene intergenic noncoding rate by dpollard to the group EisenLab on 2006-03-21 20:26:29 as ** along with 2 people balicea Garamonfok
  • Recently evolved genes identified from Drosophila yakuba and D. erecta accessory gland ESTs.
    Genetics (16 December 2005)
    by David Begun, Heather Lindfors, Melissa Thompson, Alisha Holloway
    posted to adaptive drosophila evolution gene noncoding by dpollard to the group EisenLab on 2006-03-21 19:56:01 as ****
  • Ancient duplicated conserved noncoding elements in vertebrates: A genomic and functional analysis.
    Genome Res (13 March 2006)
    by Gayle K K McEwen, Adam Woolfe, Debbie Goode, Tanya Vavouri, Heather Callaway, Greg Elgar
    posted to conserved duplication noncoding vertebrate by dpollard to the group EisenLab on 2006-03-21 18:49:40 as ** along with 4 people and 2 groups dchughes tabu sujaikumar maximilianh G4ID Genetics-of-Gambling
  • PLoS Computational Biology: Selective constraint on noncoding regions of hominid genomes
    posted to constraint genome hominid noncoding selection by indigoviolet to the group EisenLab on 2005-11-14 04:09:28 as ***
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