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Group: TNT - with tag network [21 articles]

グループ TNT のメンバーが最近追加した論文の一覧 with tag network
  • Structure and evolution of gene regulatory networks in microbial genomes.
    Research in microbiology, Vol. 158, No. 10. (December 2007), pp. 787-794.
    by SC Janga, J Collado-Vides
    posted to genome network regulation transcription by gcarbajosa to the group TNT on 2008-07-30 15:42:10 as **
  • The organization of the microbial biodegradation network from a systems-biology perspective.
    EMBO Rep, Vol. 4, No. 10. (October 2003), pp. 994-999.
    by F Pazos, A Valencia, V De Lorenzo
    posted to biodegradation for-the-review network regulation by gcarbajosa to the group TNT on 2008-07-22 16:55:45 as *** along with 1 person icases
  • Inferring the genetic network of m-xylene metabolism through expression profiling of the xyl genes of Pseudomonas putida mt-2
    Molecular Microbiology, Vol. 57, No. 6. (September 2005), pp. 1557-1569.
    by Francisco Velazquez, Victor Parro, Victor de Lorenzo
    posted to biodegradation for-the-review integration m-xylene network post-transcriptional regulation stress tol transcription by gcarbajosa to the group TNT on 2008-07-10 16:13:36 as ***
  • The growing scope of applications of genome-scale metabolic reconstructions using Escherichia coli
    Nature Biotechnology, Vol. 26, No. 6. (06 June 2008), pp. 659-667.
    by Adam M Feist, Bernhard
    posted to coli genome metabolic network reconstruction by gcarbajosa to the group TNT on 2008-07-10 11:41:39 as ** along with 4 people and 1 group fishtank ptrobajo michaelbarton AlexanderPico BergmanLab
  • Tools for Visually Exploring Biological Networks.
    Bioinformatics (25 August 2007)
    by Matthew Suderman, Michael Hallett
    posted to network by icases to the group TNT on 2007-08-28 23:11:32 as ** along with 12 people and 2 groups jyuh dullhunk sebastien_vigneau grahamc sgoetz cabbagezs cerami loopback007 Pao-Yang schuylrp AlexanderPico hryk ParkinsonLab_at_MaRS Cancer_Stem_Cells
  • Network motifs: theory and experimental approaches
    Nature Reviews Genetics, Vol. 8, No. 6., pp. 450-461.
    by Uri Alon
    posted to transcription network by icases to the group TNT on 2007-05-20 11:38:23 as ** along with 17 people and 3 groups cswinburne dlobo kentz aalibes cmmorel jtaylor dbikard margaritis shigepong zwang grinfish Pascalichouchou xingxu karfunkel vietanh0 haarcuba Borelli GEB Centre de Recherches Interdisciplinaires SynBioSys
  • Inferring Pairwise Regulatory Relationships from Multiple Time Series Datasets.
    Bioinformatics (19 January 2007)
    by Yanxin Shi, Tom Mitchell, Ziv Bar-Joseph
    posted to regulation network modelling by icases to the group TNT on 2007-02-11 14:49:41 as *****
  • Metabolic modeling of microbial strains in silico.
    Trends Biochem Sci, Vol. 26, No. 3. (March 2001), pp. 179-186.
    by MW Covert, CH Schilling, I Famili, JS Edwards, II Goryanin, E Selkov, BO Palsson
    posted to simulation prediction pathways network metabolism metabolic bacteria by icases to the group TNT on 2007-01-26 17:36:46 as ** along with 1 person and 1 group raiyar steinmetzlab
  • Metabolic flux balance analysis and the in silico analysis of Escherichia coli K-12 gene deletions.
    BMC Bioinformatics, Vol. 1 (2000)
    by JS Edwards, BO Palsson
    posted to simulation prediction pathways network metabolism bacteria by icases to the group TNT on 2007-01-26 17:36:11 as ** along with 1 person and 1 group raiyar steinmetzlab
  • Transcriptional regulation of protein complexes within and across species
    PNAS, Vol. 104, No. 4. (23 January 2007), pp. 1283-1288.
    by Kai Tan, Tomer Shlomi, Hoda Feizi, Trey Ideker, Roded Sharan
    posted to transcription regulation network evolution by icases to the group TNT on 2007-01-25 19:33:03 as ***** along with 4 people and 1 group nickluscombe zwang dylan77 carlk EBI-regulation
  • Large-Scale Mapping and Validation of Escherichia coli Transcriptional Regulation from a Compendium of Expression Profiles
    PLoS Biology, Vol. 5, No. 1. (1 January 2007), e8.
    by Jeremiah J Faith, Boris Hayete, Joshua T Thaden, Ilaria Mogno, Jamey Wierzbowski, Guillaume Cottarel, Simon Kasif, James J Collins, Timothy S Gardner
    posted to bacteria network promoter regulation transcription by icases to the group TNT on 2007-01-12 01:06:15 as ** along with 7 people and 1 group jfr teuder nickluscombe aswin heliopais austin roys EBI-regulation
  • Analysis of Growth of Lactobacillus plantarum WCFS1 on a Complex Medium Using a Genome-scale Metabolic Model.
    J Biol Chem, Vol. 281, No. 52. (29 December 2006), pp. 40041-40048.
    by Bas Teusink, Anne Wiersma, Douwe Molenaar, Christof Francke, Willem M M de Vos, Roland J J Siezen, Eddy J J Smid
    posted to bacteria metabolism network prediction simulation by icases to the group TNT on 2006-12-26 23:36:24 as **
  • Using a quantitative blueprint to reprogram the dynamics of the flagella gene network.
    Cell, Vol. 117, No. 6. (11 June 2004), pp. 713-720.
    by S Kalir, U Alon
    posted to flagella network by adria to the group TNT on 2006-12-20 10:33:37 as ** along with 2 people dbikard comb
  • Stable evolutionary signal in a Yeast protein interaction network.
    BMC Evol Biol, Vol. 6 (2006)
    by S Wuchty, AL Barabási, MT Ferdig
    posted to interaction network protein yeast by icases to the group TNT on 2006-12-18 11:40:33 as ** along with 1 person tuck
  • Adaptive evolution of bacterial metabolic networks by horizontal gene transfer
    Nature Genetics, Vol. 37, No. 12. (20 November 2005), pp. 1372-1375.
    by Csaba Pál, Balázs Papp, Martin J Lercher
    posted to evolution metabolic metabolism network by icases to the group TNT on 2006-12-17 10:47:12 as ** along with 3 people knaseanka tny michaelbarton
  • An integrated view of protein evolution
    Nature Reviews Genetics, Vol. 7, No. 5., pp. 337-348.
    by Csaba Pál, Balázs Papp, Martin J Lercher
    posted to evolution metabolic network by icases to the group TNT on 2006-12-17 10:46:23 as ** along with 7 people and 1 group dayjm tny entropy markbothwell BioNica mingzhi phoenixzxl Bothwellab
  • Chance and necessity in the evolution of minimal metabolic networks
    Nature, Vol. 440, No. 7084., pp. 667-670.
    by Csaba Pã¡l, Balã¡zs Papp, Martin J Lercher, Pã©ter Csermely, Stephen G Oliver, Laurence D Hurst
    posted to evolution metabolic metabolism network by icases to the group TNT on 2006-12-17 10:45:23 as ** along with 8 people and 1 group okarsligil Borelli ccots nirfriedman rabu mikaelhuss edwardmorrissey michaelbarton Bioinformatics
  • Variability and memory of protein levels in human cells
    Nature (19 November 2006)
    by Alex Sigal, Ron Milo, Ariel Cohen, Naama Geva-Zatorsky, Yael Klein, Yuvalal Liron, Nitzan Rosenfeld, Tamar Danon, Natalie Perzov, Uri Alon
    posted to dynamics eukariot network by icases to the group TNT on 2006-12-15 13:43:25 as ** along with 4 people and 2 groups jjray marcius margaritis cjeans BioinfoCIPF SGU-CIPF
  • Topological basis of signal integration in the transcriptional-regulatory network of the yeast, Saccharomyces cerevisiae
    BMC Bioinformatics, Vol. 7 (28 October 2006), 478.
    by Illes J Farkas, Chuang Wu, Chakra Chennubhotla, Ivet Bahar, Zoltan N Oltvai
    posted to network transcription yeast by icases to the group TNT on 2006-12-14 10:11:26 as *** along with 1 person SeungjoonOh
  • Transcriptional regulatory networks in Saccharomyces cerevisiae.
    Science, Vol. 298, No. 5594. (25 October 2002), pp. 799-804.
    by TI Lee, NJ Rinaldi, F Robert, DT Odom, Z Bar-Joseph, GK Gerber, NM Hannett, CT Harbison, CM Thompson, I Simon, J Zeitlinger, EG Jennings, HL Murray, DB Gordon, B Ren, JJ Wyrick, JB Tagne, TL Volkert, E Fraenkel, DK Gifford, RA Young
    posted to network by icases to the group TNT on 2005-02-24 22:26:43 as read along with 26 people and 1 group camster snuppepuppan forluvoft ggrot alokm opheliav samal sameetmehta cconboy koller jguinney franklin timflutre jpoyatos lusk nklee karfunkel mimulus_99 roys njcitulike brant kristallreiner Borelli Takayuki dquest siebert dbk-lab
  • Genomic analysis of regulatory network dynamics reveals large topological changes.
    Nature, Vol. 431, No. 7006. (16 September 2004), pp. 308-312.
    by NM Luscombe, MM Babu, H Yu, M Snyder, SA Teichmann, M Gerstein
    posted to dynamics metabolism network simulation yeast by icases to the group TNT on 2005-02-08 14:56:06 as ***** along with 21 people and 6 groups vertikalist camster snuppepuppan hununu lna lfriedl alexg nirfriedman dgront nickluscombe kairita comb kengg gespim koller timflutre fishtank cjeans rebeccamancy faion carlk BTS-PT-AS-CS dbk-lab kdl EBI-regulation ColDyn Plantandetc
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