SCOR: a Structural Classification of RNA database.

by: PS Klosterman, M Tamura, SR Holbrook, SE Brenner

Nucleic Acids Res, Vol. 30, No. 1. (1 January 2002), pp. 392-394.

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Abstract

The Structural Classification of RNA (SCOR) database provides a survey of the three-dimensional motifs contained in 259 NMR and X-ray RNA structures. In one classification, the structures are grouped according to function. The RNA motifs, including internal and external loops, are also organized in a hierarchical classification. The 259 database entries contain 223 internal and 203 external loops; 52 entries consist of fully complementary duplexes. A classification of the well-characterized tertiary interactions found in the larger RNA structures is also included along with examples. The SCOR database is accessible at http://scor.lbl.gov.

@article{citeulike:1004697, abstract = {The Structural Classification of RNA (SCOR) database provides a survey of the three-dimensional motifs contained in 259 NMR and X-ray RNA structures. In one classification, the structures are grouped according to function. The RNA motifs, including internal and external loops, are also organized in a hierarchical classification. The 259 database entries contain 223 internal and 203 external loops; 52 entries consist of fully complementary duplexes. A classification of the well-characterized tertiary interactions found in the larger RNA structures is also included along with examples. The SCOR database is accessible at http://scor.lbl.gov.}, address = {Physical Biosciences Division, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA 94720, USA.}, author = {Klosterman, P. S. and Tamura, M. and Holbrook, S. R. and Brenner, S. E. }, citeulike-article-id = {1004697}, doi = {http://dx.doi.org/10.1093/nar/30.1.392}, issn = {1362-4962}, journal = {Nucleic Acids Res}, keywords = {databases, rna, structure}, month = {January}, number = {1}, pages = {392--394}, posted-at = {2006-12-21 14:21:00}, priority = {2}, title = {SCOR: a Structural Classification of RNA database.}, url = {http://dx.doi.org/10.1093/nar/30.1.392}, volume = {30}, year = {2002} }

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TY - JOUR ID - citeulike:1004697 L3 - citeulike-article-id:1004697 TI - SCOR: a Structural Classification of RNA database. JF - Nucleic Acids Res VL - 30 IS - 1 SP - 392 EP - 394 AD - Physical Biosciences Division, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA 94720, USA. SN - 1362-4962 N2 - The Structural Classification of RNA (SCOR) database provides a survey of the three-dimensional motifs contained in 259 NMR and X-ray RNA structures. In one classification, the structures are grouped according to function. The RNA motifs, including internal and external loops, are also organized in a hierarchical classification. The 259 database entries contain 223 internal and 203 external loops; 52 entries consist of fully complementary duplexes. A classification of the well-characterized tertiary interactions found in the larger RNA structures is also included along with examples. The SCOR database is accessible at http://scor.lbl.gov. KW - databases KW - rna KW - structure AU - Klosterman, PS AU - Tamura, M AU - Holbrook, SR AU - Brenner, SE PY - 2002/01/01/ UR - http://dx.doi.org/10.1093/nar/30.1.392 ER -

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