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Group: BioinfoCIPF - with tag review [146 articles]

グループ BioinfoCIPF のメンバーが最近追加した論文の一覧 with tag review
  • From microscopes to microarrays: dissecting recurrent chromosomal rearrangements
    Nat Rev Genet, Vol. 8, No. 11. (November 2007), pp. 869-883.
    by Beverly S Emanuel, Sulagna C Saitta
    posted to aberration duplication rearrangement review by ealloza to the group BioinfoCIPF on 2007-10-22 11:21:18 as **** along with 3 people rdiaz jdiezperezj giovenko
  • Cancer systems biology: exploring cancer-associated genes on cellular networks.
    Cell Mol Life Sci, Vol. 64, No. 14. (July 2007), pp. 1752-1762.
    by E Wang, A Lenferink, M O'Connor-McCourt
    posted to systems_biology review interactome cancer by ealloza to the group BioinfoCIPF on 2007-09-17 18:16:29 as *** along with 2 people and 1 group jfr diging_data BTS-PT-AS-CS
  • The role of microRNAs in cancer: No small matter
    European Journal of Cancer, Vol. 43, No. 10. (July 2007), pp. 1529-1544.
    by Erik A Wiemer
    posted to review microrna human cancer by ealloza to the group BioinfoCIPF on 2007-07-06 12:55:40 as read along with 4 people cerami maralena mdphillips srp33
  • Functional interpretation of microarray experiments.
    OMICS, Vol. 10, No. 3. (2006), pp. 398-410.
    by J Dopazo
    posted to review microarray gene_set_analysis gene_list_analysis by ealloza to the group BioinfoCIPF on 2007-06-25 17:38:29 as read along with 1 person jfr
  • THE EVOLUTIONARY DYNAMICS OF EUKARYOTIC GENE ORDER
    Nat Rev Genet, Vol. 5, No. 4. (April 2004), pp. 299-310.
    by Laurence D Hurst, Csaba Pal, Martin J Lercher
    posted to review gene_order functional_annotation by ealloza to the group BioinfoCIPF on 2007-06-13 11:56:04 as *****
  • RNA structure: experimental analysis.
    Curr Opin Microbiol (24 May 2007)
    by Brice Felden
    posted to structure rna review experimental by marcius to the group BioinfoCIPF on 2007-06-12 12:56:46 as ** along with 3 people and 1 group penka emidio_capriotti debatebob SGU-CIPF
  • The epigenetic progenitor origin of human cancer
    Nature Reviews Genetics, Vol. 7, No. 1., pp. 21-33.
    by Andrew P Feinberg, Rolf Ohlsson, Steven Henikoff
    posted to review human epigenetics cancer by ealloza to the group BioinfoCIPF on 2007-05-14 12:08:43 as ***** along with 8 people and 1 group strands tuck sebastien_vigneau Garamonfok loopback007 waghsk tdmckee srp33 Cancer_Stem_Cells
  • Interpretation of microarray data in cancer
    British Journal of Cancer, Vol. aop, No. current. (06 March 2007)
    by S Michiels, S Koscielny, C Hill
    posted to validation review prediction microarray expression cancer by ealloza to the group BioinfoCIPF on 2007-04-19 15:05:07 as ** along with 4 people frohike laral jfr bioyang
  • MicroRNAs and cancer
    British Journal of Surgery, Vol. 94, No. 1. (January 2007), pp. 23-30.
    by Wijnhoven, , Michael, , Watson,
    posted to review microrna microarray human expression cancer by ealloza to the group BioinfoCIPF on 2007-04-10 15:55:07 as ** along with 2 people tardigrade Garamonfok
  • Modeling non-random deletions in cancer
    Seminars in Cancer Biology, Vol. 17, No. 1. (February 2007), pp. 19-30.
    by Maria Kost-Alimova, Stefan Imreh
    posted to review human deletion cancer aberration by ealloza to the group BioinfoCIPF on 2007-04-03 15:05:15 as ****
  • The chromosomal basis of cancer.
    Cell Oncol, Vol. 27, No. 5-6. (2005), pp. 293-318.
    by P Duesberg, R Li, A Fabarius, R Hehlmann
    posted to review chromosome cancer aberration by ealloza to the group BioinfoCIPF on 2007-03-29 14:38:23 as read along with 1 person Garamonfok
  • Chromosome aberrations in solid tumors.
    Nat Genet, Vol. 34, No. 4. (August 2003), pp. 369-376.
    by DG Albertson, C Collins, F McCormick, JW Gray
    posted to aberration cancer chromosome human review by ealloza to the group BioinfoCIPF on 2007-03-08 13:09:03 as ** along with 2 people jfr Garamonfok
  • A census of human cancer genes.
    Nat Rev Cancer, Vol. 4, No. 3. (March 2004), pp. 177-183.
    by PA Futreal, L Coin, M Marshall, T Down, T Hubbard, R Wooster, N Rahman, MR Stratton
    posted to cancer human review by ealloza to the group BioinfoCIPF on 2007-02-19 12:51:55 as read along with 13 people jyuh aalibes jfr bedo frohike leelarcombe emb51 yeastyboy Ao_Li2007 lyndon kristen Petersarkies cerami
  • Computational prediction of cancer-gene function
    Nature Reviews Cancer, Vol. 7, No. 1. (14 December 2006), pp. 23-34.
    by Pingzhao Hu, Gary Bader, Dennis A Wigle, Andrew Emili
    posted to cancer computational functional_annotation ontology prediction review by ealloza to the group BioinfoCIPF on 2007-02-15 15:33:31 as read along with 6 people jyuh jfr emb51 Garamonfok cerami srp33
  • Enrichment or depletion of a GO category within a class of genes: which test?
    Bioinformatics (20 December 2006)
    by Isabelle Rivals, Léon Personnaz, Lieng Taing, Marie-Claude C Potier
    posted to algorithm comparison expression gene_list_analysis microarray review by ealloza to the group BioinfoCIPF on 2007-02-15 10:51:18 as ** along with 8 people and 1 group paszkows winterschlaefer jyuh grahamc capitall zhouyu yas maralena ParkinsonLab_at_MaRS
  • Structural proteomics: from the molecule to the system
    Nature Structural & Molecular Biology, Vol. 14, No. 1., pp. 3-4.
    by Lucia Banci, Wolfgang Baumeister, Josefina Enfedaque, Udo Heinemann, Gunter Schneider, Israel Silman, Joel L Sussman
    posted to meeting proteomics review structural_genomics structure views by marcius to the group BioinfoCIPF on 2007-01-09 09:39:59 as ** along with 1 person and 1 group gerry SGU-CIPF
  • RNAs everywhere: genome-wide annotation of structured RNAs.
    J Exp Zoolog B Mol Dev Evol (14 December 2006)
    by Rolf Backofen, Stephan H H Bernhart, Christoph Flamm, Claudia Fried, Guido Fritzsch, Jörg Hackermüller, Jana Hertel, Ivo L L Hofacker, Kristin Missal, Axel Mosig, Sonja J J Prohaska, Dominic Rose, Peter F F Stadler, Andrea Tanzer, Stefan Washietl, Sebastian Will
    posted to classification review rna by marcius to the group BioinfoCIPF on 2007-01-03 12:59:57 as ** along with 11 people and 4 groups jfr bala eckart_bindewald tardigrade andersbj penka cdawson ilh raylim jayster4 maralena microRNA SGU-CIPF DictyosteliumGroup GIG
  • RNA structure: the long and the short of it.
    Curr Opin Struct Biol, Vol. 15, No. 3. (June 2005), pp. 302-308.
    by SR Holbrook
    posted to review rna structure by marcius to the group BioinfoCIPF on 2006-11-29 12:55:28 as ** along with 2 people and 1 group eckart_bindewald debatebob SGU-CIPF
  • Cancer as a robust system: implications for anticancer therapy.
    Nat Rev Cancer, Vol. 4, No. 3. (March 2004), pp. 227-235.
    by H Kitano
    posted to cancer human review by ealloza to the group BioinfoCIPF on 2006-11-28 10:36:12 as ** along with 1 person and 2 groups rhem1224 TCR_Signaling SysbioMPI-TCells
  • Mammalian microRNAs: a small world for fine-tuning gene expression.
    Mamm Genome, Vol. 17, No. 3. (March 2006), pp. 189-202.
    by C Sevignani, GA Calin, LD Siracusa, CM Croce
    posted to cancer instability microrna review by ealloza to the group BioinfoCIPF on 2006-11-27 19:12:44 as **** along with 3 people and 3 groups eckart_bindewald andersbj dchughes microRNA G4ID Genetics-of-Gambling
  • Synthetic biology--putting engineering into biology
    Bioinformatics, Vol. 22, No. 22. (15 November 2006), pp. 2790-2799.
    by Matthias Heinemann, Sven Panke
    posted to biology review synthetic_biology by marcius to the group BioinfoCIPF on 2006-11-24 08:21:40 as ** along with 6 people and 2 groups dbikard aalibes jtaylor Freecat fishtank karfunkel SynBioSys SGU-CIPF
  • RNA structures and folding: from conventional to new issues in structure predictions.
    Curr Opin Struct Biol, Vol. 7, No. 2. (April 1997), pp. 229-235.
    by P Schuster, PF Stadler, A Renner
    posted to prediction review rna structure by marcius to the group BioinfoCIPF on 2006-10-23 17:16:19 as ** along with 1 person and 1 group emidio_capriotti SGU-CIPF
  • NMR spectroscopy of RNA.
    Chembiochem, Vol. 4, No. 10. (6 October 2003), pp. 936-962.
    by B Fürtig, C Richter, J Wöhnert, H Schwalbe
    posted to nmr review rna by marcius to the group BioinfoCIPF on 2006-10-22 12:10:22 as ** along with 1 person and 1 group bmduggan SGU-CIPF
  • Mapping protein-protein interactions in solution by NMR spectroscopy.
    Biochemistry, Vol. 41, No. 1. (8 January 2002), pp. 1-7.
    by ER Zuiderweg
    posted to nmr protein_interactions review by marcius to the group BioinfoCIPF on 2006-10-22 12:09:51 as ** along with 1 person and 1 group dgruiz SGU-CIPF
  • Virtual drug discovery and development for neglected diseases through public-private partnerships.
    Nat Rev Drug Discov, Vol. 2, No. 11. (November 2003), pp. 919-928.
    by S Nwaka, RG Ridley
    posted to discovery disease drug review views by marcius to the group BioinfoCIPF on 2006-10-21 15:23:40 as ** along with 1 person and 1 group yaredo SGU-CIPF
  • Antimalarial drug discovery: efficacy models for compound screening.
    Nat Rev Drug Discov, Vol. 3, No. 6. (June 2004), pp. 509-520.
    by DA Fidock, PJ Rosenthal, SL Croft, R Brun, S Nwaka
    posted to discovery disease drug review views by marcius to the group BioinfoCIPF on 2006-10-21 15:22:59 as ** along with 1 group SGU-CIPF
  • Drug discovery and beyond: the role of public-private partnerships in improving access to new malaria medicines
    Transactions of the Royal Society of Tropical Medicine and Hygiene, Vol. 99, No. Supplement 1. (2005), pp. 20-29.
    by Solomon Nwaka
    posted to discovery disease drug review views by marcius to the group BioinfoCIPF on 2006-10-21 15:22:06 as ** along with 1 person and 1 group cmmorel SGU-CIPF
  • Structural bioinformatic approaches to the discovery of new antimycobacterial drugs.
    Curr Pharm Des, Vol. 10, No. 26. (2004), pp. 3195-3211.
    by K Kantardjieff, B Rupp
    posted to bioinformatics docking drug ligand protein review by marcius to the group BioinfoCIPF on 2006-10-21 14:23:24 as ** along with 1 group SGU-CIPF
  • Virtual screening in structure-based drug discovery.
    Mini Rev Med Chem, Vol. 4, No. 7. (September 2004), pp. 779-791.
    by X Barril, RE Hubbard, SD Morley
    posted to algorithms docking drug ligand protein review by marcius to the group BioinfoCIPF on 2006-10-21 14:22:35 as ** along with 1 group SGU-CIPF
  • Virtual screening in lead discovery and optimization.
    Curr Opin Drug Discov Devel, Vol. 7, No. 4. (July 2004), pp. 396-403.
    by AN Jain
    posted to algorithms docking drug ligand protein review by marcius to the group BioinfoCIPF on 2006-10-21 14:21:52 as ** along with 1 group SGU-CIPF
  • Technological advances in high-throughput screening.
    Am J Pharmacogenomics, Vol. 4, No. 4. (2004), pp. 263-276.
    by B Liu, S Li, J Hu
    posted to hts review by marcius to the group BioinfoCIPF on 2006-10-21 14:19:20 as ** along with 1 group SGU-CIPF
  • Docking and scoring in virtual screening for drug discovery: methods and applications.
    Nat Rev Drug Discov, Vol. 3, No. 11. (November 2004), pp. 935-949.
    by DB Kitchen, H Decornez, JR Furr, J Bajorath
    posted to algorithms docking drug ligand protein review by marcius to the group BioinfoCIPF on 2006-10-21 14:16:46 as ** along with 6 people and 8 groups BragilMassoud dgruiz beapen anita yongzhao sangeetha Bioinformatics structure-bii TSRI_MGL Atopic_and_Seborrhoeic_Dermatitis Skin_Deep insilicodrug Applied_Bimatics SGU-CIPF
  • A detailed comparison of current docking and scoring methods on systems of pharmaceutical relevance.
    Proteins, Vol. 56, No. 2. (1 August 2004), pp. 235-249.
    by E Perola, WP Walters, PS Charifson
    posted to docking drug ligand protein review by marcius to the group BioinfoCIPF on 2006-10-21 14:16:10 as ** along with 4 people and 2 groups ramensky BragilMassoud yongzhao schlauchi TSRI_MGL SGU-CIPF
  • Current status of virtual screening as analysed by target class.
    Med Chem, Vol. 2, No. 1. (January 2006), pp. 89-112.
    by MJ Stoermer
    posted to algorithms docking drug ligand protein review by marcius to the group BioinfoCIPF on 2006-10-21 14:14:08 as ** along with 1 person and 2 groups yongzhao TSRI_MGL SGU-CIPF
  • Recent development and application of virtual screening in drug discovery: an overview.
    Curr Pharm Des, Vol. 10, No. 9. (2004), pp. 1011-1033.
    by T Hou, X Xu
    posted to algorithms docking drug ligand protein review by marcius to the group BioinfoCIPF on 2006-10-21 14:12:44 as ** along with 1 group SGU-CIPF
  • A review of protein-small molecule docking methods.
    J Comput Aided Mol Des, Vol. 16, No. 3. (March 2002), pp. 151-166.
    by RD Taylor, PJ Jewsbury, JW Essex
    posted to algorithms docking drug ligand protein review by marcius to the group BioinfoCIPF on 2006-10-21 14:11:15 as ** along with 3 people and 3 groups sangeetha schlauchi massivemayhem Bioinformatics insilicodrug SGU-CIPF
  • Computational tools for protein modeling.
    Curr Protein Pept Sci, Vol. 1, No. 1. (July 2000), pp. 1-21.
    by D Xu, Y Xu, EC Uberbacher
    posted to algorithms protein review by marcius to the group BioinfoCIPF on 2006-10-21 14:10:31 as ** along with 1 person and 1 group granujilla SGU-CIPF
  • Modelling and simulation: a computational perspective in anticancer drug discovery.
    Curr Med Chem Anticancer Agents, Vol. 4, No. 5. (September 2004), pp. 401-403.
    by F Gago
    posted to algorithms cancer docking drug ligand protein review by marcius to the group BioinfoCIPF on 2006-10-21 14:08:41 as ** along with 1 person and 3 groups sangeetha Bioinformatics insilicodrug SGU-CIPF
  • Docking: successes and challenges.
    Curr Pharm Des, Vol. 11, No. 3. (2005), pp. 323-333.
    by V Mohan, AC Gibbs, MD Cummings, EP Jaeger, RL DesJarlais
    posted to algorithms docking drug ligand protein review by marcius to the group BioinfoCIPF on 2006-10-21 14:08:05 as ** along with 1 person and 1 group kazemi SGU-CIPF
  • New methodologies for ligand-based virtual screening.
    Curr Pharm Des, Vol. 11, No. 9. (2005), pp. 1189-1202.
    by FL Stahura, J Bajorath
    posted to algorithms docking drug ligand protein review by marcius to the group BioinfoCIPF on 2006-10-21 14:03:11 as ** along with 1 person and 3 groups sangeetha Bioinformatics insilicodrug SGU-CIPF
  • Evaluation of docking performance: comparative data on docking algorithms.
    J Med Chem, Vol. 47, No. 3. (29 January 2004), pp. 558-565.
    by M Kontoyianni, LM McClellan, GS Sokol
    posted to algorithms docking review by marcius to the group BioinfoCIPF on 2006-10-21 13:59:39 as ** along with 4 people and 4 groups yongzhao sangeetha insilico schuwi Bioinformatics TSRI_MGL insilicodrug SGU-CIPF
  • Cell biology: Brief encounters bolster contacts
    Nature (15 October 2006)
    by Tom L Blundell, Juan Fernández-Recio
    posted to protein_interactions review views by marcius to the group BioinfoCIPF on 2006-10-20 13:21:56 as ** along with 1 person and 1 group bicko SGU-CIPF
  • Genetics of global gene expression
    Nature Reviews Genetics, Vol. 7, No. 11., pp. 862-872.
    by Matthew V Rockman, Leonid Kruglyak
    posted to expression microarray review by ealloza to the group BioinfoCIPF on 2006-10-19 11:30:26 as *** along with 16 people and 9 groups dpollard tardigrade balicea dchughes nickluscombe neveaire aswin qfwills giovanni mlovell grahamc lp2 emarker natstreet mimulus_99 jyuh Biostatistics Computational-Genomics Bioinformatics EisenLab Neuroscience G4ID EBI-regulation GeschwindLab Genetics-of-Gambling
  • Recent advances in the development and application of implicit solvent models in biomolecule simulations.
    Curr Opin Struct Biol, Vol. 14, No. 2. (April 2004), pp. 217-224.
    by M Feig, CL Brooks
    posted to biophysics foce_field folding protein_structure review by marcius to the group BioinfoCIPF on 2006-10-02 10:50:01 as ** along with 5 people and 1 group apostola simone ttjoseph gane5h RamuAnandakrishnan SGU-CIPF
  • Effective energy functions for protein structure prediction.
    Curr Opin Struct Biol, Vol. 10, No. 2. (April 2000), pp. 139-145.
    by T Lazaridis, M Karplus
    posted to biophysics foce_field folding protein_structure review by marcius to the group BioinfoCIPF on 2006-10-02 10:49:24 as ** along with 2 people and 1 group karbak nigham SGU-CIPF
  • Empirical force fields for biological macromolecules: Overview and issues
    Journal of Computational Chemistry, Vol. 25, No. 13. (1 July 2004), pp. 1584-1604.
    by Alexander D Mackerell
    posted to biophysics foce_field folding protein_structure review by marcius to the group BioinfoCIPF on 2006-10-02 10:47:07 as ** along with 5 people and 1 group BragilMassoud dgront loison mirzazadeh AndreaColetta SGU-CIPF
  • Force fields for protein simulations.
    Adv Protein Chem, Vol. 66 (2003), pp. 27-85.
    by JW Ponder, DA Case
    posted to biophysics foce_field folding protein_structure review by marcius to the group BioinfoCIPF on 2006-10-02 10:46:40 as ** along with 3 people and 1 group karbak papatonyhill hmk SGU-CIPF
  • Thermodynamics of protein folding: a microscopic view.
    Biophys Chem, Vol. 100, No. 1-3. (2003), pp. 367-395.
    by T Lazaridis, M Karplus
    posted to biophysics foce_field folding protein_structure review by marcius to the group BioinfoCIPF on 2006-10-02 10:46:31 as ** along with 1 person and 1 group karbak SGU-CIPF
  • Computational methods for RNA structure determination.
    Curr Opin Struct Biol, Vol. 11, No. 3. (June 2001), pp. 282-286.
    by F Major, R Griffey
    posted to algorithms bioinformatics review rna structure by marcius to the group BioinfoCIPF on 2006-09-13 15:18:38 as ** along with 3 people and 1 group lillekatt P2324548 eckart_bindewald SGU-CIPF
  • Progress of structural genomics initiatives: an analysis of solved target structures.
    J Mol Biol, Vol. 348, No. 5. (20 May 2005), pp. 1235-1260.
    by AE Todd, RL Marsden, JM Thornton, CA Orengo
    posted to review structural_genomics by marcius to the group BioinfoCIPF on 2006-09-08 12:28:45 as ** along with 2 people and 1 group bicko jwm SGU-CIPF
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