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Group: BioinfoCIPF - with tag protein_domains [15 articles]

グループ BioinfoCIPF のメンバーが最近追加した論文の一覧 with tag protein_domains
  • Modeling the Evolution of Protein Domain Architectures Using Maximum Parsimony
    Journal of Molecular Biology, Vol. 366, No. 1. (9 February 2007), pp. 307-315.
    by Jessica H Fong, Lewis Y Geer, Anna R Panchenko, Stephen H Bryant
    posted to protein_domains evolution bioinformatics algorithms by marcius to the group BioinfoCIPF on 2007-01-25 08:31:09 as ** along with 5 people and 2 groups icases tny choonpeng redelings zwang SGU-CIPF TNT
  • Protein–Protein Interactions More Conserved within Species than across Species
    PLoS Computational Biology, Vol. 2, No. 7. (1 July 2006), e79.
    by Sven Mika, Burkhard Rost
    posted to algorithms evolution protein_domains protein_interactions by marcius to the group BioinfoCIPF on 2006-10-22 12:13:05 as ** along with 4 people and 1 group jeremymiller chad_davis skhadar dquest SGU-CIPF
  • Structural Modeling of Protein Interactions by Analogy: Application to PSD-95
    PLoS Computational Biology, Vol. preprint, No. 2006. (1 October 2006)
    by Dmitry Korkin, Fred P Davis, Frank Alber, Tinh Luong, Min-Yi Shen, Vladan Lucic, Mary B Kennedy, Andrej Sali
    posted to algorithms comparative_docking comparative_modeling protein_domains protein_interactions by marcius to the group BioinfoCIPF on 2006-10-22 12:12:40 as ** along with 1 person and 1 group bicko SGU-CIPF
  • The Many Faces of Protein–Protein Interactions: A Compendium of Interface Geometry
    PLoS Computational Biology, Vol. 2, No. 9. (1 September 2006), e124.
    by Wan K Kim, Andreas Henschel, Christof Winter, Michael Schroeder
    posted to algorithms databases protein_domains protein_interactions by marcius to the group BioinfoCIPF on 2006-10-22 12:12:00 as ** along with 8 people and 1 group raik bicko chad_davis choonpeng Evangelia wilbur allmensch marck SGU-CIPF
  • KemaDom: a web server for domain prediction using kernel machine with local context.
    Nucleic Acids Res, Vol. 34, No. Web Server issue. (1 July 2006)
    by L Chen, W Wang, S Ling, C Jia, F Wang
    posted to ab-initio bioinformatics prediction protein_domains by marcius to the group BioinfoCIPF on 2006-09-11 09:35:21 as ** along with 2 people and 1 group skhadar gulkur SGU-CIPF
  • Partitioning Protein Structures into Domains: Why Is it so Difficult?
    Journal of Molecular Biology, Vol. 361, No. 3. (18 August 2006), pp. 562-590.
    by Timothy A Holland, Stella Veretnik, Ilya N Shindyalov, Philip E Bourne
    posted to bioinformatics protein_domains review by marcius to the group BioinfoCIPF on 2006-09-07 17:18:43 as ** along with 2 people and 1 group chad_davis tny SGU-CIPF
  • Equivalent binding sites reveal convergently evolved interaction motifs
    Bioinformatics, Vol. 22, No. 5. (1 March 2006), pp. 550-555.
    by Andreas Henschel, Wan K Kim, Michael Schroeder
    posted to bioinformatics evolution protein_domains protein_interactions by marcius to the group BioinfoCIPF on 2006-09-07 17:16:11 as ** along with 2 people and 1 group chad_davis nickolay SGU-CIPF
  • Emergence of protein fold families through rational design.
    PLoS Comput Biol, Vol. 2, No. 7. (7 July 2006)
    by F Ding, NV Dokholyan, E Shakhnovich
    posted to biophysics classification protein_domains by marcius to the group BioinfoCIPF on 2006-07-19 10:40:04 as ** along with 2 people and 1 group insectopalo kgutwin SGU-CIPF
  • Computer-aided NMR assay for detecting natively folded structural domains.
    Protein Sci (7 March 2006)
    by Takayuki Hondoh, Atsushi Kato, Shigeyuki Yokoyama, Yutaka Kuroda
    posted to computational_biology nmr protein_domains by marcius to the group BioinfoCIPF on 2006-03-15 23:01:54 as ** along with 1 group SGU-CIPF
  • Comprehensive genome analysis of 203 genomes provides structural genomics with new insights into protein family space
    Nucleic Acids Research, Vol. 34, No. 3. (2006), pp. 1066-1080.
    by Russell L Marsden, David Lee, Michael Maibaum, Corin Yeats, Christine A Orengo
    posted to bioinformatics evolution genome protein_domains structural_genomics by marcius to the group BioinfoCIPF on 2006-03-15 23:00:52 as ** along with 1 person and 1 group eweaver SGU-CIPF
  • On the evolution of protein folds: are similar motifs in different protein folds the result of convergence, insertion, or relics of an ancient peptide world?
    J Struct Biol, Vol. 134, No. 2-3. (n 2001), pp. 191-203.
    by AN Lupas, CP Ponting, RB Russell
    posted to bioinformatics evolution folding protein_domains protein_fragments by marcius to the group BioinfoCIPF on 2006-02-24 06:52:09 as ** along with 1 person and 1 group chad_davis SGU-CIPF
  • The Relationship Between Domain Duplication and Recombination
    Journal of Molecular Biology, Vol. 346, No. 1. (11 February 2005), pp. 355-365.
    by Christine Vogel, Sarah A Teichmann, Jose Pereira-Leal
    posted to bioinformatics classification folding protein_domains by marcius to the group BioinfoCIPF on 2006-01-27 01:16:19 as ** along with 5 people and 3 groups ana tny cjeans martainn mdimon structural_bioinformatics Bioinformatics SGU-CIPF
  • Evaluation of domain prediction in CASP6.
    Proteins (26 September 2005)
    by Chin-Hsien H Tai, Woei-Jyh J Lee, James J J Vincent, Byungkook Lee
    posted to cafasp casp model_evaluation protein_domains by marcius to the group BioinfoCIPF on 2005-10-22 09:08:12 as **** along with 1 person and 1 group nigham SGU-CIPF
  • Automated prediction of domain boundaries in CASP6 targets using Ginzu and RosettaDOM.
    Proteins (26 September 2005)
    by David E E Kim, Dylan Chivian, Lars Malmström, David Baker
    posted to cafasp casp protein_domains ab-initio by marcius to the group BioinfoCIPF on 2005-10-22 09:07:40 as *** along with 1 person and 1 group jwm SGU-CIPF
  • Domain definition and target classification for CASP6.
    Proteins (26 September 2005)
    by Michael Tress, Chin-Hsien H Tai, Guoli Wang, Iakes Ezkurdia, Gonzalo López, Alfonso Valencia, Byungkook Lee, Roland L L Dunbrack
    posted to cafasp casp protein_domains by marcius to the group BioinfoCIPF on 2005-10-22 09:01:23 as *** along with 1 group SGU-CIPF
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