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著者: Frishman [42 articles]

Recent papers posted to CiteULike by the author Frishman.
  • Conservation of protein-protein interactions - lessons from ascomycota
    Trends in Genetics, Vol. 20, No. 2. (February 2004), pp. 72-76.
    by Philipp Pagel, Hans-Werner Mewes, Dmitrij Frishman
    posted to no-tag by cerca on 2008-07-17 16:03:37 as **
  • Online dynamic graph drawing.
    IEEE transactions on visualization and computer graphics, Vol. 14, No. 4. (g 2008), pp. 727-740.
    by Y Frishman, A Tal
    posted to graphs computers computer algorithm by cmmorel on 2008-07-05 12:53:12 as **
  • Protein solubility: sequence based prediction and experimental verification.
    Bioinformatics (6 December 2006)
    by Pawel Smialowski, Antonio J J Martin-Galiano, Aleksandra Mikolajka, Tobias Girschick, Tad A A Holak, Dmitrij Frishman
    posted to own by girschick on 2008-07-02 15:10:55 as ** along with 3 people jyuh chad_davis bobychan
  • Seventy-five percent accuracy in protein secondary structure prediction.
    Proteins, Vol. 27, No. 3. (March 1997), pp. 329-335.
    by D Frishman, P Argos
    posted to 200806_prop by wenhan on 2008-06-25 16:22:06 as ** along with 2 people chad_davis eweaver
  • Protein abundance profiling of the Escherichia coli cytosol
    BMC Genomics, Vol. 9 (27 February 2008), 102.
    by Yasushi Ishihama, Thorsten Schmidt, Juri Rappsilber, Matthias Mann, Ulrich F Hartl, Michael J Kerner, Dmitrij Frishman
    posted to quantitation proteomics by brianb on 2008-06-08 04:08:16 as ** along with 2 people Retchless osilander
  • Deciphering the evolution and metabolism of an anammox bacterium from a community genome
    Nature, Vol. 440, No. 7085., pp. 790-794.
    by Marc Strous, Eric Pelletier, Sophie Mangenot, Thomas Rattei, Angelika Lehner, Michael W Taylor, Matthias Horn, Holger Daims, Delphine Bartol-Mavel, Patrick Wincker, Valã©rie Barbe, Nuria Fonknechten, David Vallenet, Bã©atrice Segurens, Chantal Schenowitz-Truong, Claudine Mã©digue, Astrid Collingro, Berend Snel, Bas E Dutilh, Huub, Chris van der Drift, Irina Cirpus, Katinka T van de Pas-Schoonen, Harry R Harhangi, Laura van Niftrik, Markus Schmid, Jan Keltjens, Jack van de Vossenberg, Boran Kartal, Harald Meier, Dmitrij Frishman, Martijn A Huynen, Hans-Werner Mewes, Jean Weissenbach, Mike SM Jetten, Michael Wagner, Denis Le Paslier
    posted to community_genomics anammox by vrich on 2008-05-16 15:25:50 as ** along with 1 person and 2 groups kinestetika anammox microbiology_nijmegen
  • MIPS: analysis and annotation of genome information in 2007.
    Nucleic acids research, Vol. 36, No. Database issue. (January 2008)
    by HW Mewes, S Dietmann, D Frishman, R Gregory, G Mannhaupt, KF Mayer, M Münsterkötter, A Ruepp, M Spannagl, V Stümpflen, T Rattei
    posted to no-tag by jyuh on 2008-05-10 09:57:42 as **
  • No statistical support for correlation between the positions of protein interaction sites and alternatively spliced regions.
    BMC Bioinformatics, Vol. 5 (19 April 2004)
    by MN Offman, RN Nurtdinov, MS Gelfand, D Frishman
    posted to domains by antonkratz on 2008-04-23 07:30:19 as ** along with 1 person ramensky
  • Co-evolving residues in membrane proteins
    Bioinformatics, Vol. 23, No. 24. (15 December 2007), pp. 3312-3319.
    by Angelika Fuchs, Antonio J Martin-Galiano, Matan Kalman, Sarel Fleishman, Nir Ben-Tal, Dmitrij Frishman
    posted to co-evolution by phoenixzxl on 2008-03-14 06:35:56 as ** along with 5 people and 2 groups operon breden cjeans zwang blasco_morozzo SFUAntibodyResearch signal-duplication
  • Predicting experimental properties of proteins from sequence by machine learning techniques.
    Curr Protein Pept Sci, Vol. 8, No. 2. (April 2007), pp. 121-133.
    by P Smialowski, AJ Martin-Galiano, J Cox, D Frishman
    posted to machine_learning protein_solubility by bobychan on 2008-03-10 16:40:40 as read
  • Phylogenetic web profiler.
    Bioinformatics, Vol. 19, No. 6. (12 April 2003), pp. 782-783.
    by P Wong, G Kolesov, D Frishman, WA Houry
    posted to master by operon on 2008-03-10 02:00:09 as **
  • Applying negative rule mining to improve genome annotation
    BMC Bioinformatics, Vol. 8 (21 July 2007), 261.
    by Irena I Artamonova, Goar Frishman, Dmitrij Frishman
    posted to recent_genefinding by wenhan on 2008-02-25 17:53:26 as ** along with 1 person sgoetz
  • CORUM: the comprehensive resource of mammalian protein complexes.
    Nucleic Acids Res, Vol. 36, No. Database issue. (January 2008)
    by A Ruepp, B Brauner, I Dunger-Kaltenbach, G Frishman, C Montrone, M Stransky, B Waegele, T Schmidt, ON Doudieu, V Stümpflen, HW Mewes
    posted to no-tag by shung on 2008-02-25 03:44:37 as ** along with 1 person jyuh
  • Combining diverse evidence for gene recognition in completely sequenced bacterial genomes.
    Nucleic Acids Res, Vol. 26, No. 12. (15 June 1998), pp. 2941-2947.
    by D Frishman, A Mironov, HW Mewes, M Gelfand
    posted to metagenomics_0208 200806_prop by wenhan on 2008-02-14 19:36:56 as ** along with 1 person and 1 group azazello MBLAB
  • The genome sequence of the thermoacidophilic scavenger Thermoplasma acidophilum.
    Nature, Vol. 407, No. 6803. (28 September 2000), pp. 508-513.
    by A Ruepp, W Graml, ML Santos-Martinez, KK Koretke, C Volker, HW Mewes, D Frishman, S Stocker, AN Lupas, W Baumeister
    posted to no-tag by treangen on 2008-01-22 10:10:58 as ***
  • Knowledge-based protein secondary structure assignment.
    Proteins, Vol. 23, No. 4. (December 1995), pp. 566-579.
    by D Frishman, P Argos
    posted to no-tag by saravan on 2007-12-25 00:52:04 as ** along with 1 person choonpeng
  • The genome sequence of the filamentous fungus Neurospora crassa.
    Nature, Vol. 422, No. 6934. (24 April 2003), pp. 859-868.
    by JE Galagan, SE Calvo, KA Borkovich, EU Selker, ND Read, D Jaffe, W FitzHugh, LJ Ma, S Smirnov, S Purcell, B Rehman, T Elkins, R Engels, S Wang, CB Nielsen, J Butler, M Endrizzi, D Qui, P Ianakiev, D Bell-Pedersen, MA Nelson, M Werner-Washburne, CP Selitrennikoff, JA Kinsey, EL Braun, A Zelter, U Schulte, GO Kothe, G Jedd, W Mewes, C Staben, E Marcotte, D Greenberg, A Roy, K Foley, J Naylor, N Stange-Thomann, R Barrett, S Gnerre, M Kamal, M Kamvysselis, E Mauceli, C Bielke, S Rudd, D Frishman, S Krystofova, C Rasmussen, RL Metzenberg, DD Perkins, S Kroken, C Cogoni, G Macino, D Catcheside, W Li, RJ Pratt, SA Osmani, CP DeSouza, L Glass, MJ Orbach, JA Berglund, R Voelker, O Yarden, M Plamann, S Seiler, J Dunlap, A Radford, R Aramayo, DO Natvig, LA Alex, G Mannhaupt, DJ Ebbole, M Freitag, I Paulsen, MS Sachs, ES Lander, C Nusbaum, B Birren
    posted to fungi genome_paper neurospora by stajich to the group Berkeley Mycology on 2007-12-12 19:02:30 as read along with 5 people sdinka jwortman alexl GustavoLacerda bootsy
  • DIMA 2.0 predicted and known domain interactions.
    Nucleic Acids Res (13 November 2007)
    by Philipp Pagel, Matthias Oesterheld, Oksana Tovstukhina, Norman Strack, Volker Stümpflen, Dmitrij Frishman
    posted to algorithm database binding by chad_davis on 2007-12-03 12:59:36 as ***
  • Proteome-wide analysis of chaperonin-dependent protein folding in Escherichia coli.
    Cell, Vol. 122, No. 2. (29 July 2005), pp. 209-220.
    by MJ Kerner, DJ Naylor, Y Ishihama, T Maier, HC Chang, AP Stines, C Georgopoulos, D Frishman, M Hayer-Hartl, M Mann, FU Hartl
    posted to tob by Ema on 2007-11-24 14:35:56 as **
  • Dynamic Drawing of Clustered Graphs
    Information Visualization, 2004. INFOVIS 2004. IEEE Symposium on (2004), pp. 191-198.
    by Y Frishman, Ayellet Tal
    posted to clustering drawing dynamic graph by sakaradam on 2007-10-10 13:59:09 as ***
  • Alternative splicing and protein function.
    BMC Bioinformatics, Vol. 6, No. 1. (7 November 2005)
    by Alexey D Neverov, Irena I Artamonova, Ramil N Nurtdinov, Dmitrij Frishman, Mikhail Gelfand, Andrey Mironov
    posted to as by antonkratz on 2007-09-18 10:26:08 as ** along with 2 people and 3 groups jestrada dalloliogm Web2 splicing yeast
  • Protein annotation at genomic scale: the current status.
    Chem Rev, Vol. 107, No. 8. (August 2007), pp. 3448-3466.
    by D Frishman
    posted to annotation b2gpaper2 by sgoetz on 2007-09-10 14:12:49 as read
  • Illuminating the Evolutionary History of Chlamydiae
    Science, Vol. 304, No. 5671. (30 April 2004), pp. 728-730.
    by Matthias Horn, Astrid Collingro, Stephan Schmitz-Esser, Cora L Beier, Ulrike Purkhold, Berthold Fartmann, Petra Brandt, Gerald J Nyakatura, Marcus Droege, Dmitrij Frishman, Thomas Rattei, Hans-Werner Mewes, Michael Wagner
    posted to tf by karfunkel on 2007-08-15 15:38:54 as **
  • Will my protein crystallize? A sequence-based predictor.
    Proteins, Vol. 62, No. 2. (1 February 2006), pp. 343-355.
    by P Smialowski, T Schmidt, J Cox, A Kirschner, D Frishman
    posted to classification feature_selection structure algorithm proj_disocons by chad_davis on 2007-06-07 16:37:02 as **** along with 1 person and 2 groups ana structural_bioinformatics Bioinformatics
  • MIPS: a database for genomes and protein sequences.
    Nucleic Acids Res, Vol. 27, No. 1. (1 January 1999), pp. 44-48.
    by HW Mewes, K Heumann, A Kaps, K Mayer, F Pfeiffer, S Stocker, D Frishman
    posted to no-tag by balajis on 2007-05-21 03:23:53 as ** along with 1 person and 1 group irenas dbk-lab
  • SNAPping up functionally related genes based on context information: a colinearity-free approach.
    J Mol Biol, Vol. 311, No. 4. (24 August 2001), pp. 639-656.
    by G Kolesov, HW Mewes, D Frishman
    posted to genomic_context by bootsy on 2007-05-14 14:46:26 as **
  • The DIMA web resourceexploring the protein domain network
    Bioinformatics, Vol. 22, No. 8. (15 April 2006), pp. 997-998.
    by Philipp Pagel, Matthias Oesterheld, Dmitrij Frishman
    posted to bioinformatic by bootsy on 2007-05-04 18:21:54 as ** along with 2 people and 2 groups chad_davis marcius BioinfoCIPF SGU-CIPF
  • notes MIPS: analysis and annotation of proteins from whole genomes in 2005.
    Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006)
    by HW Mewes, D Frishman, KF Mayer, M Münsterkötter, O Noubibou, P Pagel, T Rattei, M Oesterheld, A Ruepp, V Stümpflen
    posted to mips by eukfn on 2006-11-22 22:15:24 as **
  • Physiologic, psychologic, and metabolic consequences of bariatric surgery.
    Cardiol Rev, Vol. 14, No. 5. (t 2006), pp. 232-237.
    by VL Mango, WH Frishman
    posted to obesity by waffle168 on 2006-09-24 18:07:32 as ** along with 1 group mgh-lcs
  • Obesity: new perspectives and pharmacotherapies.
    Cardiol Rev, Vol. 14, No. 5. (t 2006), pp. 238-258.
    by KL Palamara, HR Mogul, SJ Peterson, WH Frishman
    posted to obesity by waffle168 on 2006-09-24 18:06:26 as ** along with 1 group mgh-lcs
  • Intrinsically photosensitive retinal ganglion cells detect light with a vitamin A-based photopigment, melanopsin.
    Proc Natl Acad Sci U S A, Vol. 102, No. 29. (19 July 2005), pp. 10339-10344.
    by Y Fu, H Zhong, MH Wang, DG Luo, HW Liao, H Maeda, S Hattar, LJ Frishman, KW Yau
    posted to melanopsin by morven on 2006-07-25 17:13:02 as **
  • The PEDANT genome database in 2005.
    Nucleic Acids Res, Vol. 33, No. Database issue. (1 January 2005)
    by ML Riley, T Schmidt, C Wagner, HW Mewes, D Frishman
    posted to classic database by chad_davis on 2006-07-16 14:30:51 as *** along with 1 person eweaver
  • Fold designability, distribution, and disease.
    PLoS Comput Biol, Vol. 2, No. 5. (May 2006)
    by P Wong, D Frishman
    posted to disease structure proj_disocons by chad_davis on 2006-07-14 14:26:34 as read
  • MIPS: analysis and annotation of proteins from whole genomes.
    Nucleic Acids Res, Vol. 32 Database issue (1 January 2004)
    by HW Mewes, C Amid, R Arnold, D Frishman, U Gueldener, G Mannhaupt, M Muensterkoetter, P Pagel, N Strack, V Stuempflen, J Warfsmann, A Ruepp
    posted to classic database by chad_davis on 2006-07-11 14:44:45 as * along with 2 people and 2 groups irenas lfriedl dbk-lab kdl
  • MIPS: a database for genomes and protein sequences.
    Nucleic Acids Res, Vol. 30, No. 1. (1 January 2002), pp. 31-34.
    by HW Mewes, D Frishman, U Gueldener, G Mannhaupt, K Mayer, M Mokrejs, B Morgenstern, M Muensterkoetter, S Rudd, B Weil
    posted to classic yeast database by chad_davis on 2006-07-11 14:25:27 as * along with 1 person and 1 group irenas dbk-lab
  • PROMPT: a protein mapping and comparison tool
    BMC Bioinformatics, Vol. 7 (04 July 2006), 331.
    by Thorsten Schmidt, Dmitrij Frishman
    posted to proteomics software by jmeppley on 2006-07-11 00:20:33 as ** along with 1 person chad_davis
  • Dobutamine: a new synthetic cardioactive sympathetic amine.
    N Engl J Med, Vol. 300, No. 1. (4 January 1979), pp. 17-22.
    by EH Sonnenblick, WH Frishman, TH LeJemtel
    posted to cardiology by abelmagalhaes on 2006-06-20 20:13:14 as **
  • Designability, aggregation propensity and duplication of disease-associated proteins.
    Protein Eng Des Sel, Vol. 18, No. 10. (October 2005), pp. 503-508.
    by P Wong, A Fritz, D Frishman
    posted to disease structure proj_disocons by chad_davis on 2006-06-16 12:12:33 as read
  • SNAPping up Functionally Related Genes Based on Context Information: A Colinearity-free Approach
    Journal of Molecular Biology, Vol. 311, No. 4. (August 2001), pp. 639-656.
    by G Kolesov, HW Mewes, D Frishman
    posted to proteomics by eweaver on 2005-12-22 17:03:21 as **
  • Mining sequence annotation databanks for association patterns.
    Bioinformatics, Vol. 21, No. Suppl_3. (1 November 2005)
    by Irena I I Artamonova, Goar Frishman, Mikhail S S Gelfand, Dmitrij Frishman
    posted to association data learning machine mining rule by ujh on 2005-11-26 12:04:43 as *****
  • The scotopic threshold response of the dark-adapted electroretinogram of the mouse.
    J Physiol, Vol. 543, No. Pt 3. (15 September 2002), pp. 899-916.
    by SM Saszik, JG Robson, LJ Frishman
    posted to erg by morven on 2005-11-24 17:43:08 as **
  • MIPS: a database for genomes and protein sequences.
    Nucleic Acids Res, Vol. 28, No. 1. (1 January 2000), pp. 37-40.
    by HW Mewes, D Frishman, C Gruber, B Geier, D Haase, A Kaps, K Lemcke, G Mannhaupt, F Pfeiffer, C Schüller, S Stocker, B Weil
    posted to db yeast by irenas on 2004-11-15 17:09:22 along with 1 group dbk-lab
    • 注: このページを引用する時は次のURLでどうぞ: http://www.citeulike.org/author/Frishman

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