Nature Biotechnology, Vol. 26, No. 7. (08 July 2008), pp. 779-785.
by Thomas A
Down, Vardhman K
Rakyan, Daniel J
Turner, Paul
Flicek, Heng
Li, Eugene
Kulesha, Stefan
Gräf, Nathan
Johnson, Javier
Herrero, Eleni M
Tomazou, Natalie P
Thorne, Liselotte
Bäckdahl, Marlis
Herberth, Kevin L
Howe, David K
Jackson, Marcos M
Miretti, John C
Marioni, Ewan
Birney, Tim JP
Hubbard, Richard
Durbin, Simon
Tavaré, Stephan
Beck
Genome Res. (10 July 2008), gr.067181.107.
Genome Res., Vol. 17, No. 6. (1 June 2007), pp. 691-707.
by Christoph M
Koch, Robert M
Andrews, Paul
Flicek, Shane C
Dillon, Ulas
Karaoz, Gayle K
Clelland, Sarah
Wilcox, David M
Beare, Joanna C
Fowler, Phillippe
Couttet, Keith D
James, Gregory C
Lefebvre, Alexander W
Bruce, Oliver M
Dovey, Peter D
Ellis, Pawandeep
Dhami, Cordelia F
Langford, Zhiping
Weng, Ewan
Birney, Nigel P
Carter, David
Vetrie, Ian
Dunham
Nucl. Acids Res., Vol. 29, No. 1. (1 January 2001), pp. 37-40.
by R
Apweiler, TK
Attwood, A
Bairoch, A
Bateman, E
Birney, M
Biswas, P
Bucher, L
Cerutti, F
Corpet, MDR
Croning, R
Durbin, L
Falquet, W
Fleischmann, J
Gouzy, H
Hermjakob, N
Hulo, I
Jonassen, D
Kahn, A
Kanapin, Y
Karavidopoulou, R
Lopez, B
Marx, NJ
Mulder, TM
Oinn, M
Pagni, F
Servant, CJA
Sigrist, EM
Zdobnov
Nature Methods, Vol. 5, No. 4., pp. 297-298.
Science, Vol. 298, No. 5591. (4 October 2002), pp. 129-149.
by RA
Holt, GM
Subramanian, A
Halpern, GG
Sutton, R
Charlab, DR
Nusskern, P
Wincker, AG
Clark, JM
Ribeiro, R
Wides, SL
Salzberg, B
Loftus, M
Yandell, WH
Majoros, DB
Rusch, Z
Lai, CL
Kraft, JF
Abril, V
Anthouard, P
Arensburger, PW
Atkinson, H
Baden, V
de Berardinis, D
Baldwin, V
Benes, J
Biedler, C
Blass, R
Bolanos, D
Boscus, M
Barnstead, S
Cai, A
Center, K
Chaturverdi, GK
Christophides, MA
Chrystal, M
Clamp, A
Cravchik, V
Curwen, A
Dana, A
Delcher, I
Dew, CA
Evans, M
Flanigan, A
Grundschober-Freimoser, L
Friedli, Z
Gu, P
Guan, R
Guigo, ME
Hillenmeyer, SL
Hladun, JR
Hogan, YS
Hong, J
Hoover, O
Jaillon, Z
Ke, C
Kodira, E
Kokoza, A
Koutsos, I
Letunic, A
Levitsky, Y
Liang, JJ
Lin, NF
Lobo, JR
Lopez, JA
Malek, TC
McIntosh, S
Meister, J
Miller, C
Mobarry, E
Mongin, SD
Murphy, DA
O'Brochta, C
Pfannkoch, R
Qi, MA
Regier, K
Remington, H
Shao, MV
Sharakhova, CD
Sitter, J
Shetty, TJ
Smith, R
Strong, J
Sun, D
Thomasova, LQ
Ton, P
Topalis, Z
Tu, MF
Unger, B
Walenz, A
Wang, J
Wang, M
Wang, X
Wang, KJ
Woodford, JR
Wortman, M
Wu, A
Yao, EM
Zdobnov, H
Zhang, Q
Zhao, S
Zhao, SC
Zhu, I
Zhimulev, M
Coluzzi, A
della Torre, CW
Roth, C
Louis, F
Kalush, RJ
Mural, EW
Myers, MD
Adams, HO
Smith, S
Broder, MJ
Gardner, CM
Fraser, E
Birney, P
Bork, PT
Brey, JC
Venter, J
Weissenbach, FC
Kafatos, FH
Collins, SL
Hoffman
Genome Res. (24 June 2008), gr.077479.108.
by Vardhman
Rakyan, Thomas
Down, Natalie
Thorne, Paul
Flicek, Eugene
Kulesha, Stefan
Graf, Eleni
Tomazou, Liselotte
Backdahl, Nathan
Johnson, Marils
Herberth, Kevin
Howe, David
Jackson, Marcos
Miretti, Heike
Fiegler, John
Marioni, Ewan
Birney, Tim
Hubbard, Nigel
Carter, Simon
Tavare, Stephan
Beck
Genome Biology, Vol. 8 (08 January 2007), R5.
Trends in parasitology, Vol. 20, No. 2. (February 2004), pp. 49-52.
Genome Res, Vol. 10, No. 4. (April 2000), pp. 547-548.
Proceedings of the International Conference on Intelligent Systems for Molecular Biology, Vol. 5 (1997), pp. 56-64.
Science, Vol. 287, No. 5461. (24 March 2000), pp. 2204-2215.
by GM
Rubin, MD
Yandell, JR
Wortman, GL
Gabor Miklos, CR
Nelson, IK
Hariharan, ME
Fortini, PW
Li, R
Apweiler, W
Fleischmann, JM
Cherry, S
Henikoff, MP
Skupski, S
Misra, M
Ashburner, E
Birney, MS
Boguski, T
Brody, P
Brokstein, SE
Celniker, SA
Chervitz, D
Coates, A
Cravchik, A
Gabrielian, RF
Galle, WM
Gelbart, RA
George, LS
Goldstein, F
Gong, P
Guan, NL
Harris, BA
Hay, RA
Hoskins, J
Li, Z
Li, RO
Hynes, SJ
Jones, PM
Kuehl, B
Lemaitre, JT
Littleton, DK
Morrison, C
Mungall, PH
O'Farrell, OK
Pickeral, C
Shue, LB
Vosshall, J
Zhang, Q
Zhao, XH
Zheng, S
Lewis
Nature, Vol. 446, No. 7132., pp. 153-158.
by Christopher
Greenman, Philip
Stephens, Raffaella
Smith, Gillian L
Dalgliesh, Christopher
Hunter, Graham
Bignell, Helen
Davies, Jon
Teague, Adam
Butler, Claire
Stevens, Sarah
Edkins, Sarah
O’meara, Imre
Vastrik, Esther E
Schmidt, Tim
Avis, Syd
Barthorpe, Gurpreet
Bhamra, Gemma
Buck, Bhudipa
Choudhury, Jody
Clements, Jennifer
Cole, Ed
Dicks, Simon
Forbes, Kris
Gray, Kelly
Halliday, Rachel
Harrison, Katy
Hills, Jon
Hinton, Andy
Jenkinson, David
Jones, Andy
Menzies, Tatiana
Mironenko, Janet
Perry, Keiran
Raine, Dave
Richardson, Rebecca
Shepherd, Alexandra
Small, Calli
Tofts, Jennifer
Varian, Tony
Webb, Sofie
West, Sara
Widaa, Andy
Yates, Daniel P
Cahill, David N
Louis, Peter
Goldstraw, Andrew G
Nicholson, Francis
Brasseur, Leendert
Looijenga, Barbara L
Weber, Yoke-Eng
Chiew, Anna
Defazio, Mel F
Greaves, Anthony R
Green, Peter
Campbell, Ewan
Birney, Douglas F
Easton, Georgia
Chenevix-Trench, Min-Han
Tan, Sok K
Khoo, Bin T
Teh, Siu T
Yuen, Suet Y
Leung, Richard
Wooster, Andrew P
Futreal, Michael R
Stratton
Nucleic Acids Res (13 November 2007)
by P
Flicek, B L L
Aken, K
Beal, B
Ballester, M
Caccamo, Y
Chen, L
Clarke, G
Coates, F
Cunningham, T
Cutts, T
Down, S C C
Dyer, T
Eyre, S
Fitzgerald, J
Fernandez-Banet, S
Gräf, S
Haider, M
Hammond, R
Holland, K L L
Howe, K
Howe, N
Johnson, A
Jenkinson, A
Kähäri, D
Keefe, F
Kokocinski, E
Kulesha, D
Lawson, I
Longden, K
Megy, P
Meidl, B
Overduin, A
Parker, B
Pritchard, A
Prlic, S
Rice, D
Rios, M
Schuster, I
Sealy, G
Slater, D
Smedley, G
Spudich, S
Trevanion, A J J
Vilella, J
Vogel, S
White, M
Wood, E
Birney, T
Cox, V
Curwen, R
Durbin, X M M
Fernandez-Suarez, J
Herrero, T J P J
Hubbard, A
Kasprzyk, G
Proctor, J
Smith, A
Ureta-Vidal, S
Searle
Nat Genet, Vol. 39, No. 7 Suppl. (July 2007)
Proteomics, Vol. 4, No. 7. (July 2004), pp. 1985-1988.
Genome Res. (18 March 2008), gr.074492.107.
Cell, Vol. 125, No. 5. (2 June 2006), pp. 836-838.
Nucl. Acids Res., Vol. 31, No. 1. (1 January 2003), pp. 43-50.
by Catherine
Brooksbank, Evelyn
Camon, Midori A
Harris, Michele
Magrane, Maria J
Martin, Nicola
Mulder, Claire
O'Donovan, Helen
Parkinson, Mary A
Tuli, Rolf
Apweiler, Ewan
Birney, Alvis
Brazma, Kim
Henrick, Rodrigo
Lopez, Guenter
Stoesser, Peter
Stoehr, Graham
Cameron
Nucl. Acids Res. (26 November 2007), gkm1018.
by Guy
Cochrane, Ruth
Akhtar, Philippe
Aldebert, Nicola
Althorpe, Alastair
Baldwin, Kirsty
Bates, Sumit
Bhattacharyya, James
Bonfield, Lawrence
Bower, Paul
Browne, Matias
Castro, Tony
Cox, Fehmi
Demiralp, Ruth
Eberhardt, Nadeem
Faruque, Gemma
Hoad, Mikyung
Jang, Tamara
Kulikova, Alberto
Labarga, Rasko
Leinonen, Steven
Leonard, Quan
Lin, Rodrigo
Lopez, Dariusz
Lorenc, Hamish
Mcwilliam, Gaurab
Mukherjee, Francesco
Nardone, Sheila
Plaister, Stephen
Robinson, Siamak
Sobhany, Robert
Vaughan, Dan
Wu, Weimin
Zhu, Rolf
Apweiler, Tim
Hubbard, Ewan
Birney
Nucleic Acids Res, Vol. 35, No. Database issue. (January 2007)
by TJ
Hubbard, BL
Aken, K
Beal, B
Ballester, M
Caccamo, Y
Chen, L
Clarke, G
Coates, F
Cunningham, T
Cutts, T
Down, SC
Dyer, S
Fitzgerald, J
Fernandez-Banet, S
Graf, S
Haider, M
Hammond, J
Herrero, R
Holland, K
Howe, K
Howe, N
Johnson, A
Kahari, D
Keefe, F
Kokocinski, E
Kulesha, D
Lawson, I
Longden, C
Melsopp, K
Megy, P
Meidl, B
Ouverdin, A
Parker, A
Prlic, S
Rice, D
Rios, M
Schuster, I
Sealy, J
Severin, G
Slater, D
Smedley, G
Spudich, S
Trevanion, A
Vilella, J
Vogel, S
White, M
Wood, T
Cox, V
Curwen, R
Durbin, XM
Fernandez-Suarez, P
Flicek, A
Kasprzyk, G
Proctor, S
Searle, J
Smith, A
Ureta-Vidal, E
Birney
Bioinformatics, Vol. 16, No. 12. (1 December 2000), pp. 1145-1150.
by R
Apweiler, TK
Attwood, A
Bairoch, A
Bateman, E
Birney, M
Biswas, P
Bucher, L
Cerutti, F
Corpet, MDR
Croning, R
Durbin, L
Falquet, W
Fleischmann, J
Gouzy, H
Hermjakob, N
Hulo, I
Jonassen, D
Kahn, A
Kanapin, Y
Karavidopoulou, R
Lopez, B
Marx, NJ
Mulder, TM
Oinn, M
Pagni, F
Servant, CJA
Sigrist, EM
Zdobnov
Mol Syst Biol, Vol. 2 (4 July 2006)
Nat Rev Genet, Vol. 9, No. 4. (April 2008), pp. 303-313.
PLoS genetics, Vol. 3, No. 9. (September 2007), pp. 1661-1671.
Nucleic Acids Res, Vol. 30, No. 1. (1 January 2002), pp. 276-280.
Genome Biology, Vol. 8 (16 March 2007), R39.
by Imre
Vastrik, Peter
D'Eustachio, Esther
Schmidt, Geeta
Joshi-Tope, Gopal
Gopinath, David
Croft, Bernard
de Bono, Marc
Gillespie, Bijay
Jassal, Suzanna
Lewis, Lisa
Matthews, Guanming
Wu, Ewan
Birney, Lincoln
Stein
Nature, Vol. 420, No. 6915. (5 December 2002), pp. 520-562.
by RH
Waterston, K
Lindblad-Toh, E
Birney, J
Rogers, JF
Abril, P
Agarwal, R
Agarwala, R
Ainscough, M
Alexandersson, P
An, SE
Antonarakis, J
Attwood, R
Baertsch, J
Bailey, K
Barlow, S
Beck, E
Berry, B
Birren, T
Bloom, P
Bork, M
Botcherby, N
Bray, MR
Brent, DG
Brown, SD
Brown, C
Bult, J
Burton, J
Butler, RD
Campbell, P
Carninci, S
Cawley, F
Chiaromonte, AT
Chinwalla, DM
Church, M
Clamp, C
Clee, FS
Collins, LL
Cook, RR
Copley, A
Coulson, O
Couronne, J
Cuff, V
Curwen, T
Cutts, M
Daly, R
David, J
Davies, KD
Delehaunty, J
Deri, ET
Dermitzakis, C
Dewey, NJ
Dickens, M
Diekhans, S
Dodge, I
Dubchak, DM
Dunn, SR
Eddy, L
Elnitski, RD
Emes, P
Eswara, E
Eyras, A
Felsenfeld, GA
Fewell, P
Flicek, K
Foley, WN
Frankel, LA
Fulton, RS
Fulton, TS
Furey, D
Gage, RA
Gibbs, G
Glusman, S
Gnerre, N
Goldman, L
Goodstadt, D
Grafham, TA
Graves, ED
Green, S
Gregory, R
Guigó, M
Guyer, RC
Hardison, D
Haussler, Y
Hayashizaki, LW
Hillier, A
Hinrichs, W
Hlavina, T
Holzer, F
Hsu, A
Hua, T
Hubbard, A
Hunt, I
Jackson, DB
Jaffe, LS
Johnson, M
Jones, TA
Jones, A
Joy, M
Kamal, EK
Karlsson, D
Karolchik, A
Kasprzyk, J
Kawai, E
Keibler, C
Kells, WJ
Kent, A
Kirby, DL
Kolbe, I
Korf, RS
Kucherlapati, EJ
Kulbokas, D
Kulp, T
Landers, JP
Leger, S
Leonard, I
Letunic, R
Levine, J
Li, M
Li, C
Lloyd, S
Lucas, B
Ma, DR
Maglott, ER
Mardis, L
Matthews, E
Mauceli, JH
Mayer, M
McCarthy, WR
McCombie, S
McLaren, K
McLay, JD
McPherson, J
Meldrim, B
Meredith, JP
Mesirov, W
Miller, TL
Miner, E
Mongin, KT
Montgomery, M
Morgan, R
Mott, JC
Mullikin, DM
Muzny, WE
Nash, JO
Nelson, MN
Nhan, R
Nicol, Z
Ning, C
Nusbaum, MJ
O'Connor, Y
Okazaki, K
Oliver, E
Overton-Larty, L
Pachter, G
Parra, KH
Pepin, J
Peterson, P
Pevzner, R
Plumb, CS
Pohl, A
Poliakov, TC
Ponce, CP
Ponting, S
Potter, M
Quail, A
Reymond, BA
Roe, KM
Roskin, EM
Rubin, AG
Rust, R
Santos, V
Sapojnikov, B
Schultz, J
Schultz, MS
Schwartz, S
Schwartz, C
Scott, S
Seaman, S
Searle, T
Sharpe, A
Sheridan, R
Shownkeen, S
Sims, JB
Singer, G
Slater, A
Smit, DR
Smith, B
Spencer, A
Stabenau, N
Stange-Thomann, C
Sugnet, M
Suyama, G
Tesler, J
Thompson, D
Torrents, E
Trevaskis, J
Tromp, C
Ucla, A
Ureta-Vidal, JP
Vinson, AC
Von Niederhausern, CM
Wade, M
Wall, RJ
Weber, RB
Weiss, MC
Wendl, AP
West, K
Wetterstrand, R
Wheeler, S
Whelan, J
Wierzbowski, D
Willey, S
Williams, RK
Wilson, E
Winter, KC
Worley, D
Wyman, S
Yang, SP
Yang, EM
Zdobnov, MC
Zody, ES
Lander,
Nat Genet, Vol. 40, No. 5. (May 2008), pp. 523-527.
by Simon N
Twigger, Kim D
Pruitt, Xose M
Fernandez-Suarez, Donna
Karolchik, Kim C
Worley, Donna R
Maglott, Garth
Brown, George
Weinstock, Richard A
Gibbs, Jim
Kent, Ewan
Birney, Howard J
Jacob
Genome Res., Vol. 12, No. 10. (1 October 2002), pp. 1611-1618.
by Jason E
Stajich, David
Block, Kris
Boulez, Steven E
Brenner, Stephen A
Chervitz, Chris
Dagdigian, Georg
Fuellen, James G
Gilbert, Ian
Korf, Hilmar
Lapp, Heikki
Lehvaslaiho, Chad
Matsalla, Chris J
Mungall, Brian I
Osborne, Matthew R
Pocock, Peter
Schattner, Martin
Senger, Lincoln D
Stein, Elia
Stupka, Mark D
Wilkinson, Ewan
Birney
Nucleic Acids Res, Vol. 33, No. Database issue. (1 January 2005)
by G
Joshi-Tope, M
Gillespie, I
Vastrik, P
D'Eustachio, E
Schmidt, B
de Bono, B
Jassal, GR
Gopinath, GR
Wu, L
Matthews, S
Lewis, E
Birney, L
Stein
Nucl. Acids Res., Vol. 30, No. 1. (1 January 2002), pp. 38-41.
by T
Hubbard, D
Barker, E
Birney, G
Cameron, Y
Chen, L
Clark, T
Cox, J
Cuff, V
Curwen, T
Down, R
Durbin, E
Eyras, J
Gilbert, M
Hammond, L
Huminiecki, A
Kasprzyk, H
Lehvaslaiho, P
Lijnzaad, C
Melsopp, E
Mongin, R
Pettett, M
Pocock, S
Potter, A
Rust, E
Schmidt, S
Searle, G
Slater, J
Smith, W
Spooner, A
Stabenau, J
Stalker, E
Stupka, A
Ureta-Vidal, I
Vastrik, M
Clamp
Genome Res, Vol. 14, No. 5. (May 2004), pp. 925-928.
by E
Birney, TD
Andrews, P
Bevan, M
Caccamo, Y
Chen, L
Clarke, G
Coates, J
Cuff, V
Curwen, T
Cutts, T
Down, E
Eyras, XM
Fernandez-Suarez, P
Gane, B
Gibbins, J
Gilbert, M
Hammond, HR
Hotz, V
Iyer, K
Jekosch, A
Kahari, A
Kasprzyk, D
Keefe, S
Keenan, H
Lehvaslaiho, G
McVicker, C
Melsopp, P
Meidl, E
Mongin, R
Pettett, S
Potter, G
Proctor, M
Rae, S
Searle, G
Slater, D
Smedley, J
Smith, W
Spooner, A
Stabenau, J
Stalker, R
Storey, A
Ureta-Vidal, KC
Woodwark, G
Cameron, R
Durbin, A
Cox, T
Hubbard, M
Clamp
Science, Vol. 316, No. 5822. (13 April 2007), pp. 222-234.
by
Rhesus, Richard A
Gibbs, Jeffrey
Rogers, Michael G
Katze, Roger
Bumgarner, George M
Weinstock, Elaine R
Mardis, Karin A
Remington, Robert L
Strausberg, Craig J
Venter, Richard K
Wilson, Mark A
Batzer, Carlos D
Bustamante, Evan E
Eichler, Matthew W
Hahn, Ross C
Hardison, Kateryna D
Makova, Webb
Miller, Aleksandar
Milosavljevic, Robert E
Palermo, Adam
Siepel, James M
Sikela, Tony
Attaway, Stephanie
Bell, Kelly E
Bernard, Christian J
Buhay, Mimi N
Chandrabose, Marvin
Dao, Clay
Davis, Kimberly D
Delehaunty, Yan
Ding, Huyen H
Dinh, Shannon
Dugan-Rocha, Lucinda A
Fulton, Ramatu A
Gabisi, Toni T
Garner, Jennifer
Godfrey, Alicia C
Hawes, Judith
Hernandez, Sandra
Hines, Michael
Holder, Jennifer
Hume, Shalini N
Jhangiani, Vandita
Joshi, Ziad M
Khan, Ewen F
Kirkness, Andrew
Cree, Gerald R
Fowler, Sandra
Lee, Lora R
Lewis, Zhangwan
Li, Yih-Shin
Liu, Stephanie M
Moore, Donna
Muzny, Lynne V
Nazareth, Dinh N
Ngo, Geoffrey O
Okwuonu, Grace
Pai, David
Parker, Heidie A
Paul, Cynthia
Pfannkoch, Craig S
Pohl, Yu-Hui
Rogers, San J
Ruiz, Aniko
Sabo, Jireh
Santibanez, Brian W
Schneider, Scott M
Smith, Erica
Sodergren, Amanda F
Svatek, Teresa R
Utterback, Selina
Vattathil, Wesley
Warren, Courtney S
White, Asif T
Chinwalla, Yucheng
Feng, Aaron L
Halpern, Ladeana W
Hillier, Xiaoqiu
Huang, Pat
Minx, Joanne O
Nelson, Kymberlie H
Pepin, Xiang
Qin, Granger G
Sutton, Eli
Venter, Brian P
Walenz, John W
Wallis, Kim C
Worley, Shiaw-Pyng
Yang, Steven M
Jones, Marco A
Marra, Mariano
Rocchi, Jacqueline E
Schein, Robert
Baertsch, Laura
Clarke, Miklos
Csuros, Jarret
Glasscock, Alan R
Harris, Paul
Havlak, Andrew R
Jackson, Huaiyang
Jiang, Yue